RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SMIM6P0DI80 62 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 MRPL58Q14197 206 aaKnown RBP14.12□□□□□ -0.15
COL18A1-203ENST00000359759 A0A1W2PPE3 182 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 PDE6DO43924 150 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 PSG2P11465 335 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 CEACAM3P40198 252 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 SPATA45Q537H7 98 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 SPANXN1Q5VSR9 72 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 ABLIM2Q6H8Q1 611 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 TMEM108Q6UXF1 575 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 ANXA10Q9UJ72 324 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 BHLHA15Q7RTS1 189 aaPredicted RBP14.12□□□□□ -0.15
COL18A1-203ENST00000359759 MSRB3Q8IXL7 192 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 SDK1Q7Z5N4 2213 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 IGKV3D-15A0A087WSY6 115 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 M0R296 226 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 IGKV3-15P01624 115 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 ECSCRQ19T08 205 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 MRPL13Q9BYD1 178 aaKnown RBP14.12□□□□□ -0.15
COL18A1-203ENST00000359759 CRHP06850 196 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 CBLN3Q6UW01 205 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 ZFP30Q9Y2G7 519 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 CD74P04233 296 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 GABRG2P18507 467 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 CRISPLD2Q9H0B8 497 aa14.12□□□□□ -0.15
COL18A1-203ENST00000359759 PDE4DIPQ5VU43 2346 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 CELA2BP08218 269 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 TMIGD3P0DMS9 266 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 CARFQ8N187 725 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 A0A1B0GUL6 1792 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 B4DEV8 164 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 PRR35P0CG20 571 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 REG1BP48304 166 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 RAB24Q969Q5 203 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 PERPQ96FX8 193 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 TMUB1Q9BVT8 246 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 CXorf1O96002 111 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 GALP22466 123 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 NRTNQ99748 197 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 SERGEFQ9UGK8 458 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 RAG2P55895 527 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 OR8I2Q8N0Y5 310 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 TP53I13Q8NBR0 393 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 CGB1A6NKQ9 187 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 LMO7DNF2Z398 122 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 CDIPTO14735 213 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 OTX1P32242 354 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 SMAD4Q13485 552 aaKnown RBP14.11□□□□□ -0.15
COL18A1-203ENST00000359759 MESTQ5EB52 335 aa14.11□□□□□ -0.15
COL18A1-203ENST00000359759 ACER2Q5QJU3 275 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 LINC01555Q8NAE3 123 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 MIEN1Q9BRT3 115 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 EVPLQ92817 2033 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 KCNE1BA0A087WTH5 132 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 TMEM50BP56557 158 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 COL5A1-AS1Q5SY13 56 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 VSTM2LQ96N03 204 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 RAB1BQ9H0U4 201 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 LILRA5A6NI73 299 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 RPL34P49207 117 aaKnown RBP14.1□□□□□ -0.15
COL18A1-203ENST00000359759 WDFY1Q8IWB7 410 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 DYNLRB2Q8TF09 96 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 Q8WTZ3 238 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 HDHD3Q9BSH5 251 aaPredicted RBP14.1□□□□□ -0.15
COL18A1-203ENST00000359759 N4BP2Q86UW6 1770 aaPredicted RBP14.1□□□□□ -0.15
COL18A1-203ENST00000359759 EMP1P54849 157 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 LPAR2Q9HBW0 351 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 SLC52A3Q9NQ40 469 aa14.1□□□□□ -0.15
COL18A1-203ENST00000359759 PLP1P60201 277 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 UBE2V2Q15819 145 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 ZNF343Q6P1L6 599 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 RND1Q92730 232 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 TRAV17A0A0B4J275 112 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 HIST1H1BP16401 226 aaKnown RBP14.09□□□□□ -0.15
COL18A1-203ENST00000359759 GFRA1P56159 465 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 SOX8P57073 446 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 CD81P60033 236 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 RTN4RQ9BZR6 473 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PIPOXQ9P0Z9 390 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PITPNC1Q9UKF7 332 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 RGPD1P0DJD0 1748 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 LINC01387J3KSC0 135 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PGA4P0DJD7 388 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PGA5P0DJD9 388 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 SLC25A42Q86VD7 318 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 CA10Q9NS85 328 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 MPLP40238 635 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 TFPI2P48307 235 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 SPEM2Q0P670 501 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PLA2G2FQ9BZM2 168 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 TRAV38-1A0A0B4J264 116 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 PPYP01298 95 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 MGAT2Q10469 447 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 HSPB9Q9BQS6 159 aa14.09□□□□□ -0.15
COL18A1-203ENST00000359759 GAGE10A6NGK3 116 aa14.08□□□□□ -0.15
COL18A1-203ENST00000359759 SIAH2O43255 324 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms