RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MRPL52Q86TS9 123 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 APCDD1LQ8NCL9 501 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZFP30Q9Y2G7 519 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RICTORQ6R327 1708 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PKD1L3Q7Z443 1732 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PRAMEF26H0Y7S4 382 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 G6PCP35575 357 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ST8SIA1Q92185 356 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RTL8AQ9BWD3 113 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 CES1P1Q9UKY3 287 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 MRPS17Q9Y2R5 130 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 IRF2P14316 349 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 VAX1Q5SQQ9 334 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 CXorf51AA0A1B0GTR3 108 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 GRIFINA4D1Z8 144 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZFAND5O76080 213 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HIST1H1EP10412 219 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PPP1CCP36873 323 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 SHBQ15464 509 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ST6GALNAC3Q8NDV1 305 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF775Q96BV0 537 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 OXGR1Q96P68 337 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 BARX1Q9HBU1 254 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 K7ESM1 405 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 KBTBD11O94819 623 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 WISP3O95389 354 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ASCL3Q9NQ33 180 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 TECRQ9NZ01 308 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF142P52746 1687 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 DSCAMO60469 2012 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HS3ST1O14792 307 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 RER1O15258 196 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 JOSD1Q15040 202 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 OR1C1Q15619 314 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 DLK2Q6UY11 383 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 C11orf40Q8WZ69 217 aa5.37□□□□□ -1.55
VPS13B-203ENST00000358544 HELZP42694 1942 aaKnown RBP5.37□□□□□ -1.55
VPS13B-203ENST00000358544 IGLV3-16A0A075B6K0 115 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 AMBPP02760 352 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 KIR3DL2P43630 455 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PRRX1P54821 245 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SUMO3P55854 103 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SRSF3P84103 164 aaKnown RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 AESQ08117 197 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FOXF1Q12946 379 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C9orf135Q5VTT2 229 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TBC1D26Q86UD7 250 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TRIB1Q96RU8 372 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR51B4Q9Y5P0 310 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 EREGO14944 169 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 EDDM3AQ14507 147 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FGF14Q92915 247 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TXNDC17Q9BRA2 123 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SMPD2O60906 423 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ZDHHC23Q8IYP9 409 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ZPLD1Q8TCW7 415 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR2W5A6NFC9 320 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 DLEU1O43261 78 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PDCD6O75340 191 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 STAG3L3P0CL85 134 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 MYEOVQ96EZ4 313 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C14orf144Q96I85 54 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 BOD1Q96IK1 185 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM250H0YL14 139 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SIRPB1O00241 398 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF816Q0VGE8 651 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FUT5Q11128 374 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 C1QL3Q5VWW1 255 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR10G3Q8NGC4 313 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR2D2Q9H210 308 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 LHX9Q9NQ69 397 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 MKRN2OSH3BPM6 223 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 SELEP16581 610 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 BTF3P20290 206 aaKnown RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 GCSHP23434 173 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 COL10A1Q03692 680 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FMODQ06828 376 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 EXT1Q16394 746 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PRAMEF20Q5VT98 475 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR13G1Q8NGZ3 307 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PP6455Q8WZ26 134 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 ABHD14BQ96IU4 210 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM204Q9BSN7 226 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 GNG7O60262 68 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 MRPL33O75394 65 aaKnown RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 COL11A1P12107 1806 aaPredicted RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 CTLA4P16410 223 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 BCL3P20749 454 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 LIMS2Q7Z4I7 341 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 BIVMQ86UB2 503 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 OR6X1Q8NH79 312 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 PATJQ8NI35 1801 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 FAM174AQ8TBP5 190 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 MRPS18BQ9Y676 258 aaKnown RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 TNRC6CQ9HCJ0 1690 aaKnown RBP5.36□□□□□ -1.55
VPS13B-203ENST00000358544 NPIPB7O75200 414 aa5.36□□□□□ -1.55
VPS13B-203ENST00000358544 GUSBP08236 651 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms