RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PGFP49763 221 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 TCTN1Q2MV58 587 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 PDPNQ86YL7 162 aa7.77□□□□□ -1.17
COL6A6-201ENST00000358511 ERRFI1Q9UJM3 462 aaPredicted RBP7.77□□□□□ -1.17
COL6A6-201ENST00000358511 HINT1P49773 126 aaPredicted RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TMEM255AQ5JRV8 349 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 WDR13Q9H1Z4 485 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 GLIPR1P48060 266 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 NPEPL1Q8NDH3 523 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ADAMTS17Q8TE56 1095 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 DUSP13Q9UII6 198 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ZMIZ1Q9ULJ6 1067 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 PCNX2A6NKB5 2137 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 IGHV3-9P01782 118 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 CD1AP06126 327 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 GAMTQ14353 236 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 FAM181AQ8N9Y4 354 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TET1Q8NFU7 2136 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TPSD1Q9BZJ3 242 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 C12orf49Q9H741 205 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 PRR13Q9NZ81 148 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 B4E171 279 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 F5H697 171 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TNFSF11O14788 317 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 HMGA1P17096 107 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ATP6V0CP27449 155 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 CD226Q15762 336 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TECRQ9NZ01 308 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TRAV8-7A0A075B6U6 113 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 LINC00587B1AMM8 73 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TRDCB7Z8K6 153 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 RER1O15258 196 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 KLK2P20151 261 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OPRK1P41145 380 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF124Q15973 351 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 DMRTC1Q5HYR2 192 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 TRAT1Q6PIZ9 186 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 CPEB3Q8NE35 698 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OIT3Q8WWZ8 545 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 HS3ST3A1Q9Y663 406 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 GLI3P10071 1580 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 PLCE1Q9P212 2302 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 IFITM10A6NMD0 228 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 CTLA4P16410 223 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR1L4Q8NGR5 311 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR2J1Q9GZK6 312 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 NKX2-2O95096 273 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 P01737 135 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 FMODQ06828 376 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 NKAIN1Q4KMZ8 207 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR52L2PQ8NGH6 319 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 P2RX4Q99571 388 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR2D2Q9H210 308 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 KIF26AQ9ULI4 1882 aaPredicted RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR4C45A6NMZ5 311 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 BMI1P35226 326 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 G6PCP35575 357 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 VAX1Q5SQQ9 334 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 MRPL43Q8N983 215 aaKnown RBP7.76□□□□□ -1.17
COL6A6-201ENST00000358511 OR8A1Q8NGG7 326 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 RNF2Q99496 336 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 KCNE5Q9UJ90 142 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 ICAM5Q9UMF0 924 aa7.76□□□□□ -1.17
COL6A6-201ENST00000358511 A0A1B0GTH9 108 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TCL1AP56279 114 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 DCAF12Q5T6F0 453 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 BOD1Q96IK1 185 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TMEM56Q96MV1 263 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 GPX7Q96SL4 187 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TIMP4Q99727 224 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 A0A1W2PN81 502 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 PLAUP00749 431 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TMIGD3P0DMS9 266 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 LPAR6P43657 344 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TCTAP57738 103 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 AGBL5Q8NDL9 886 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 MENTQ9BUN1 341 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 RPS23P62266 143 aaKnown RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 PRDX4Q13162 271 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 RIGQ13278 110 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 RTN4RL1Q86UN2 441 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR10AD1Q8NGE0 317 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 RHBDD1Q8TEB9 315 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 ABCA4P78363 2273 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 DNASE2O00115 360 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 CTSVO60911 334 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 RPS16P62249 146 aaKnown RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 ISXQ2M1V0 245 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR10V1Q8NGI7 309 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms