RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 AICDAQ9GZX7 198 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 IL17CQ9P0M4 197 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 HBZP02008 142 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 SIX1Q15475 284 aaPredicted RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 PYCR3Q53H96 274 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 C20orf196Q8IYI0 205 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 MUC20Q8N307 709 aaPredicted RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 OR1L8Q8NGR8 309 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 MYOZ1Q9NP98 299 aaPredicted RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM189A5PLL7 270 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM189-UBE2V1I3L0A0 370 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 POLR2GP62487 172 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 SRSF6Q13247 344 aaKnown RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 RCC2Q9P258 522 aaKnown RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 SFTPCP11686 197 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 C10orf128Q5T292 105 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 FAM27D1Q5T7N8 215 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 OR1N1Q8NGS0 311 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 PIK3C2AO00443 1686 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 CDX4O14627 284 aaPredicted RBP7.15□□□□□ -1.26
SCN8A-201ENST00000354534 PSG6Q00889 435 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM170BQ5T4T1 132 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 ACSM5Q6NUN0 579 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 BTLAQ7Z6A9 289 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 SPICQ8N5J4 248 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 OR10S1Q8NGN2 331 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 TM4SF18Q96CE8 201 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 ARHGAP5-AS1Q96IT6 56 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 PARLQ9H300 379 aa7.15□□□□□ -1.26
SCN8A-201ENST00000354534 C19orf67A6NJJ6 358 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 A1L4Q6 167 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 ATF1P18846 271 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 CLDN10P78369 228 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 HIST1H1AQ02539 215 aaPredicted RBP7.15□□□□□ -1.27
SCN8A-201ENST00000354534 PIANPQ8IYJ0 282 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 TRAV8-6A0A0B4J262 113 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 PSMB11A5LHX3 300 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 K7EQS6 105 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 CCR5P51681 352 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 FAM219AQ8IW50 185 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 ARIH2OSQ8N7S6 290 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 FIGNL2A6NMB9 653 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 OR4D5Q8NGN0 318 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 TMUB1Q9BVT8 246 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 CDCA4Q9BXL8 241 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 KIAA1217Q5T5P2 1943 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 SIGLEC1Q9BZZ2 1709 aa7.15□□□□□ -1.27
SCN8A-201ENST00000354534 PRSS37A4D1T9 235 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 SELENBP1Q13228 472 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 OR10J6PQ8NGY7 276 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 CCL17Q92583 94 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 LAMB1P07942 1786 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 NALCNQ8IZF0 1738 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 SFT2D2O95562 160 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RFESDQ8TAC1 157 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MAST2Q6P0Q8 1798 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 ZBTB42B2RXF5 422 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 SMIM18P0DKX4 95 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RPS27P42677 84 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 KRTCAP3Q53RY4 240 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 BIVMQ86UB2 503 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 GPR35Q9HC97 309 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 KIAA2026Q5HYC2 2103 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MYO5AQ9Y4I1 1855 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TRGC2P03986 189 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 CXCL12P48061 93 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 HFEQ30201 348 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 WNT1P04628 370 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 SRSF5Q13243 272 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 LHX8Q68G74 356 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TMEM207Q6UWW9 146 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 ARRDC1Q8N5I2 433 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TRGV8A0A0C4DH27 118 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 DUSP5Q16690 384 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TOX2Q96NM4 488 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RBPJLQ9UBG7 517 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 NPFFO15130 113 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RPS4XP62701 263 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RPL18Q07020 188 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MS4A7Q9GZW8 240 aaPredicted RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 CMC2Q9NRP2 79 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 EMCNQ9ULC0 261 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 KIF13BQ9NQT8 1826 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RAB9AP51151 201 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 ZNF117Q03924 483 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 ZFAND6Q6FIF0 208 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 KISS1RQ969F8 398 aaPredicted RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RARRES2Q99969 163 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
SCN8A-201ENST00000354534 IGHV3-21A0A0B4J1V1 117 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 FUT3P21217 361 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TM4SF1P30408 202 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 MPLP40238 635 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 TM4SF20Q53R12 229 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 CA13Q8N1Q1 262 aa7.14□□□□□ -1.27
SCN8A-201ENST00000354534 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms