RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SLC35G3Q8N808 338 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 LYZL4Q96KX0 146 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 TMEM222Q9H0R3 208 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 URGCP-MRPS24S4R325 110 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 GPR179Q6PRD1 2367 aa13.71□□□□□ -0.21
HMGA1-202ENST00000347617 TTC28Q96AY4 2481 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 RER1O15258 196 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 TCN2P20062 427 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 RAB4AP20338 218 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 PMS2P11Q13670 270 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 SLC25A26Q70HW3 274 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 TIPARPQ7Z3E1 657 aaKnown RBP13.71□□□□□ -0.22
HMGA1-202ENST00000347617 OR5L1Q8NGL2 311 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 CT55Q8WUE5 264 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 ATP5SQ99766 215 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 LIME1Q9H400 295 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 METTL7AQ9H8H3 244 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 KLRF1Q9NZS2 232 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 PIGLQ9Y2B2 252 aa13.71□□□□□ -0.22
HMGA1-202ENST00000347617 C3orf85A0A1B0GTC6 90 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 C9orf172C9J069 976 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 MPPED1O15442 326 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 IFNA1P01562 189 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 DBHP09172 617 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 MSR1P21757 451 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 MLF1P58340 268 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 HIST1H3AP68431 136 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 MYBPHQ13203 477 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 GFI1BQ5VTD9 330 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 TMEM211Q6ICI0 200 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 FOXL2NBQ6ZUU3 175 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 PPP1R32Q7Z5V6 425 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 OR10G3Q8NGC4 313 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 OR10A7Q8NGE5 316 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 IL22RA2Q969J5 263 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 PRO1933Q9H354 126 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 IL36GQ9NZH8 169 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
HMGA1-202ENST00000347617 A0A1B0GWJ7 208 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 MSTNO14793 375 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 TCAPO15273 167 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 QDPRP09417 244 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 OTX1P32242 354 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 CEBPGP53567 150 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 FXYD4P59646 89 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 SRSF7Q16629 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 RPS19BP1Q86WX3 136 aaKnown RBP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 JSRP1Q96MG2 331 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 SDF2L1Q9HCN8 221 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 SH2D2AQ9NP31 389 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
HMGA1-202ENST00000347617 CHCHD2Q9Y6H1 151 aaPredicted RBP13.69□□□□□ -0.22
HMGA1-202ENST00000347617 IFNA5P01569 189 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 BCL2P10415 239 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 FAHP16930 419 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 CDAP32320 146 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 SSR4P51571 173 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 NUTF2P61970 127 aaKnown RBP13.68□□□□□ -0.22
HMGA1-202ENST00000347617 TRIP6Q15654 476 aaKnown RBP13.68□□□□□ -0.22
HMGA1-202ENST00000347617 C10orf128Q5T292 105 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 FAM90A2PQ658T7 463 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 Q6ZS49 121 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 MRPL52Q86TS9 123 aaKnown RBP13.68□□□□□ -0.22
HMGA1-202ENST00000347617 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 OR1P1Q8NH06 330 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 NPRL2Q8WTW4 380 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 MBD3L1Q8WWY6 194 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 SPTSSAQ969W0 71 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 SGCZQ96LD1 299 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 TMEM68Q96MH6 324 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 PYGO2Q9BRQ0 406 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 CABLES2Q9BTV7 478 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 ZNF318Q5VUA4 2279 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 NKX2-6A6NCS4 301 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 DYNLT3P51808 116 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 PDZD11Q5EBL8 140 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-202ENST00000347617 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 PIGTQ969N2 578 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 MISP3Q96FF7 219 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 AGMATQ9BSE5 352 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 ABHD14AQ9BUJ0 271 aa13.68□□□□□ -0.22
HMGA1-202ENST00000347617 UBE2J1Q9Y385 318 aaPredicted RBP13.68□□□□□ -0.22
HMGA1-202ENST00000347617 A0A1W2PNU3 283 aaPredicted RBP13.67□□□□□ -0.22
HMGA1-202ENST00000347617 H3BML4 177 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 CCKARP32238 428 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 ID3Q02535 119 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 PLPPR5Q32ZL2 321 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 TMEM171Q8WVE6 324 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 REEP6Q96HR9 211 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 PSMG3Q9BT73 122 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms