RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OPN4Q9UHM6 478 aa9.75□□□□□ -0.85
SNCA-202ENST00000345009 KIAA2026Q5HYC2 2103 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 TMEM272A0A1B0GTI8 110 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 IFNA2P01563 188 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 FAM157CP0CG43 387 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 GZMHP20718 246 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 PRTN3P24158 256 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 GLIPR1P48060 266 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 TMBIM6P55061 237 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 VBP1P61758 197 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 MRPS15P82914 257 aaKnown RBP9.74□□□□□ -0.85
SNCA-202ENST00000345009 UNC119Q13432 240 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 NKAPLQ5M9Q1 402 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 USP43Q70EL4 1123 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 CORO2AQ92828 525 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 RIMS4Q9H426 269 aaPredicted RBP9.74□□□□□ -0.85
SNCA-202ENST00000345009 RNF167Q9H6Y7 350 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 UNKLQ9H9P5 680 aaKnown RBP9.74□□□□□ -0.85
SNCA-202ENST00000345009 ETAA1Q9NY74 926 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 TAS2R3Q9NYW6 316 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 RCC2Q9P258 522 aaKnown RBP9.74□□□□□ -0.85
SNCA-202ENST00000345009 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 ETV7Q9Y603 341 aa9.74□□□□□ -0.85
SNCA-202ENST00000345009 C2CD3Q4AC94 2353 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 GABARAPO95166 117 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 SLC2A2P11168 524 aaPredicted RBP9.73□□□□□ -0.85
SNCA-202ENST00000345009 RPS19P39019 145 aaKnown RBP9.73□□□□□ -0.85
SNCA-202ENST00000345009 VEGFCP49767 419 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 RORCP51449 518 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 ERVFRD-1P60508 538 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 NCS1P62166 190 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 OR52W1Q6IF63 320 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 METAP1DQ6UB28 335 aaPredicted RBP9.73□□□□□ -0.85
SNCA-202ENST00000345009 Q6ZTK2 550 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 VMO1Q7Z5L0 202 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 NR2C2APQ86WQ0 139 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 CLVS1Q8IUQ0 354 aaPredicted RBP9.73□□□□□ -0.85
SNCA-202ENST00000345009 FAM89BQ8N5H3 189 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 TPRX1Q8N7U7 411 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
SNCA-202ENST00000345009 LPAR5Q9H1C0 372 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 ATG5Q9H1Y0 275 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 KCNIP1Q9NZI2 227 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 KIF25Q9UIL4 384 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 TRAPPC2LQ9UL33 140 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 HSF4Q9ULV5 492 aa9.73□□□□□ -0.85
SNCA-202ENST00000345009 UBE2QL1A1L167 161 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 ZNF729A6NN14 1252 aaPredicted RBP9.72□□□□□ -0.85
SNCA-202ENST00000345009 C17orf98A8MV24 154 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 MT-ND4P03905 459 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 CLEC2LP0C7M8 214 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 MMP9P14780 707 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 CHATP28329 748 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 SOX6P35712 828 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 CTF1Q16619 201 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 RSBN1Q5VWQ0 802 aaPredicted RBP9.72□□□□□ -0.85
SNCA-202ENST00000345009 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 RBMS3Q6XE24 437 aaKnown RBP9.72□□□□□ -0.85
SNCA-202ENST00000345009 ZNF497Q6ZNH5 498 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 IL17RELQ6ZVW7 336 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 OR13D1Q8NGV5 346 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 ACOT12Q8WYK0 555 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 AP3S1Q92572 193 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 LHX4Q969G2 390 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 SLC25A46Q96AG3 418 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 RAB3CQ96E17 227 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 COQ2Q96H96 371 aa9.72□□□□□ -0.85
SNCA-202ENST00000345009 TRAV40A0A0B4J280 105 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 KBTBD11-OT1A0A1B0GTJ5 212 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 CCL3L1P16619 93 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 EPHA1P21709 976 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 GLP1RP43220 463 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 UBE2E1P51965 193 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 LGALS4P56470 323 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 ZNF273Q14593 569 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 C6orf183Q5T699 404 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 SIGIRRQ6IA17 410 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 HEPN1Q6WQI6 88 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 SLC16A12Q6ZSM3 486 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 ZNF554Q86TJ5 538 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 Q8N7P7 452 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 OR10A7Q8NGE5 316 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 OR10R2Q8NGX6 335 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 TBX15Q96SF7 602 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 NICN1Q9BSH3 213 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 FAAP24Q9BTP7 215 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 DCSTAMPQ9H295 470 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 KCNK15Q9H427 330 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 CHMP1AQ9HD42 196 aaPredicted RBP9.71□□□□□ -0.86
SNCA-202ENST00000345009 DIABLOQ9NR28 239 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 SIRT7Q9NRC8 400 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 MGAT4AQ9UM21 535 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 SPATA2Q9UM82 520 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 NF1P21359 2839 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms