RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 VDAC1P21796 283 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 ACER2Q5QJU3 275 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 SLC25A47Q6Q0C1 308 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 FAM185AQ8N0U4 392 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 RFNGQ9Y644 331 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 DENND4CQ5VZ89 1909 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 A0A0A6YYD4 124 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 IGKV1-9A0A0C4DH69 117 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 SELENOVP59797 346 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 RAC3P60763 192 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 FAM3AP98173 230 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 RAB31Q13636 194 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 OR10S1Q8NGN2 331 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 BSCL2Q96G97 398 aaPredicted RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 FAM103A1Q9BTL3 118 aaKnown RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 ABCA4P78363 2273 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 IGHV5-10-1A0A0J9YXX1 117 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 IL2RAP01589 272 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 MGST1P10620 155 aaKnown RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 PSG4Q00888 419 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 OR8G1Q15617 311 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 COL13A1Q5TAT6 717 aaPredicted RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 DHRS7BQ6IAN0 325 aaPredicted RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 CADM4Q8NFZ8 388 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 OR51I2Q9H344 312 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 CACFD1Q9UGQ2 172 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 A0A1W2PNV4 684 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 PSG2P11465 335 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 CCL11P51671 97 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 FNDC7Q5VTL7 733 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 BTNL3Q6UXE8 466 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 LILRB1Q8NHL6 650 aaPredicted RBP10.8□□□□□ -0.68
SNRNP48-201ENST00000342415 RNF212BA8MTL3 300 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF737O75373 536 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 HEXAP06865 529 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 GABRA4P48169 554 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 C5orf24Q7Z6I8 188 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 FAM58AQ8N1B3 248 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 A8MXE2 369 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 BMPERQ8N8U9 685 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 CA5BP1Q8WTZ4 195 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 POMT1Q9Y6A1 747 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 INTS1Q8N201 2190 aaKnown RBP10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 TGIF2-C20orf24A0A0A6YYL0 155 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 SLC25A6P12236 298 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 SNCAP37840 140 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 RND3P61587 244 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 TP53RKQ96S44 253 aa10.79□□□□□ -0.68
SNRNP48-201ENST00000342415 DOCK11Q5JSL3 2073 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 TPRX1Q8N7U7 411 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 TMEM204Q9BSN7 226 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 DOK5Q9P104 306 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 ZMAT5Q9UDW3 170 aaKnown RBP10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 BPTFQ12830 3046 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 XKRY2A2RUG3 117 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 ARGFXA6NJG6 315 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 CDIPTO14735 213 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 SH2D1BO14796 132 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 SYNGR2O43760 224 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 MELTFP08582 738 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 PMS2P11Q13670 270 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 NSUN5P2Q63ZY6 315 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 DEFB123Q8N688 67 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 WFIKKN1Q96NZ8 548 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 UCK1Q9HA47 277 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 A0A087X0M5 115 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 A0A1B0GX30 115 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 C17orf112F2Z3M2 114 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 ACTL6BO94805 426 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 OPN1MWP04001 364 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 OPN1MW2P0DN77 364 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 OPN1MW3P0DN78 364 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 TBC1D28Q2M2D7 210 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 FFAR4Q5NUL3 377 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 CYYR1Q96J86 154 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 OR2H1Q9GZK4 316 aa10.78□□□□□ -0.68
SNRNP48-201ENST00000342415 IGKV3D-11A0A0A0MRZ8 115 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 NPIPB7O75200 414 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 CD46P15529 392 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 NTF3P20783 257 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 EPHA8P29322 1005 aaPredicted RBP10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 OR3A1P47881 315 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 GNG3P63215 75 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 ZNF90Q03938 601 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 CSRP2Q16527 193 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 C6orf15Q6UXA7 325 aaPredicted RBP10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 OIT3Q8WWZ8 545 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 FAM117AQ9C073 453 aa10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 ARRDC1-AS1Q9H2J1 176 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms