RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 FOXI3A8MTJ6 420 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 PRRG2O14669 202 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SSSCA1O60232 199 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 IGHG3P01860 377 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 LPCAT3Q6P1A2 487 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SLC35G3Q8N808 338 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 C2orf50Q96LR7 162 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 MS4A7Q9GZW8 240 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SDHAF2Q9NX18 166 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 PURGQ9UJV8 347 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 TNFSF18Q9UNG2 199 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 ARFGEF3Q5TH69 2177 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 ARPC4-TTLL3A0A0A6YYG9 625 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 INO80CQ6PI98 192 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 DKK4Q9UBT3 224 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SESN1Q9Y6P5 492 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 IGHV1-18A0A0C4DH31 117 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CST4P01036 141 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SERPINE2P07093 398 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 COX5BP10606 129 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CEBPGP53567 150 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 ESCO2Q56NI9 601 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SLC25A24Q6NUK1 477 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 MOGAT3Q86VF5 341 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 LHFPL1Q86WI0 220 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SCARB1Q8WTV0 552 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 MRPS24Q96EL2 167 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 TECTBQ96PL2 329 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 RASL12Q9NYN1 266 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 POLDIP2Q9Y2S7 368 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 IGHV2OR16-5A0A0B4J2B6 119 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 NKX2-6A6NCS4 301 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 MLNRO43193 412 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 TNFSF13O75888 250 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 DTYMKP23919 212 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CYCSP99999 105 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 NRN1LQ496H8 165 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNF474Q6S9Z5 364 aaPredicted RBP8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 SEM1Q6ZVN7 128 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CMTM1Q8IZ96 169 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 CCDC71LQ8N9Z2 235 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 DMRTA2Q96SC8 542 aa8.64□□□□□ -1.03
RBFOX1-202ENST00000340209 A0A0D9SG52 128 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ADAM20O43506 726 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 BCL2L11O43521 198 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 CST7O76096 145 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 HAND1O96004 215 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 PRH1P02810 166 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 CEACAM6P40199 344 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 POLR2GP62487 172 aaKnown RBP eCLIP8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 SPINK9Q5DT21 86 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 FIP1L1Q6UN15 594 aaKnown RBP8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 NINJ1Q92982 152 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 TAF9BQ9HBM6 251 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 RAXQ9Y2V3 346 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 C3orf85A0A1B0GTC6 90 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 A0A1W2PPE3 182 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 RPS10-NUDT3A0A1W2PQS6 291 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 OR5H1A6NKK0 313 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNF705EA8MWA4 302 aaPredicted RBP8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 SH2D1BO14796 132 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 NMBP08949 121 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 SELLP14151 372 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 NBL1P41271 181 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 VAMP2P63027 116 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNF616Q08AN1 781 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 HERPUD1Q15011 391 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 C1orf185Q5T7R7 199 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ADAM5Q6NVV9 412 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 OR1L1Q8NH94 360 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 LHFPL5Q8TAF8 219 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 NUDT16L1Q9BRJ7 211 aaKnown RBP8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 RAB18Q9NP72 206 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 GLRX2Q9NS18 164 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 FAM215AQ9Y5M1 114 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 KIR2DS1A0A191URI9 304 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 FAM90A27PA6NNH2 459 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 AHRRA9YTQ3 701 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 CBR1P16152 277 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 PMELP40967 661 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 KIR2DS4P43632 304 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ID4P47928 161 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 LINC00205P59089 165 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 CCL8P80075 99 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 KIR2DS1Q14954 304 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 AANATQ16613 207 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 KRTAP27-1Q3LI81 207 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 LEAP2Q969E1 77 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms