RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 KIAA1456Q9P272 454 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 KLK13Q9UKR3 277 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 A0A1W2PPE3 182 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 ADAM11O75078 769 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NEURL1O76050 574 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 NUDT3O95989 172 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 GNG4P50150 75 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 SSBP1Q04837 148 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 UBE2V2Q15819 145 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 TMEM183BQ1AE95 376 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 CISD2Q8N5K1 135 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 CPEB3Q8NE35 698 aaKnown RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 PRSS3P2Q8NHM4 247 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 MISP3Q96FF7 219 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 AKIRIN1Q9H9L7 192 aaPredicted RBP7.66□□□□□ -1.18
RTN3-202ENST00000339997 HES4Q9HCC6 221 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 SLC52A3Q9NQ40 469 aa7.66□□□□□ -1.18
RTN3-202ENST00000339997 ABCA7Q8IZY2 2146 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 DOCK9Q9BZ29 2069 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 TMSB15BA0A087X1C1 80 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 C11orf94C9JXX5 98 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 TOX3O15405 576 aaPredicted RBP7.65□□□□□ -1.18
RTN3-202ENST00000339997 PDCD6O75340 191 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 STAG3L2P0CL84 134 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 IL11P20809 199 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 COL9A1P20849 921 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 THBS4P35443 961 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 EXT1Q16394 746 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 Q56UQ5 140 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 TMEM255AQ5JRV8 349 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 TBX15Q96SF7 602 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 A0A1B0GV90 55 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 SIAH2O43255 324 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 MMP16P51512 607 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 GUSBP11Q6P575 273 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 TMEM92Q6UXU6 159 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 OR10A7Q8NGE5 316 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 STARD4Q96DR4 205 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 ZFP64Q9NPA5 681 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 ATP23Q9Y6H3 246 aa7.65□□□□□ -1.18
RTN3-202ENST00000339997 BRCA1P38398 1863 aaKnown RBP7.65□□□□□ -1.18
RTN3-202ENST00000339997 A0A1B0GTQ1 180 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 ZNF815PA8K554 130 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 CDIPTO14735 213 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 SLC25A5P05141 298 aaKnown RBP7.65□□□□□ -1.19
RTN3-202ENST00000339997 CCL7P80098 99 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.19
RTN3-202ENST00000339997 SLC25A42Q86VD7 318 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 PHOSPHO2Q8TCD6 241 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 KCNE4Q8WWG9 221 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 VSTM2LQ96N03 204 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 RNF2Q99496 336 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 ZNF426Q9BUY5 554 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 TMEM9BQ9NQ34 198 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 WNT16Q9UBV4 365 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 TNFSF18Q9UNG2 199 aa7.65□□□□□ -1.19
RTN3-202ENST00000339997 LSM2Q9Y333 95 aaKnown RBP7.65□□□□□ -1.19
RTN3-202ENST00000339997 GATCO43716 136 aaKnown RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 HPP00738 406 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 HYAL1Q12794 435 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 COTL1Q14019 142 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 SDHCQ99643 169 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 HSD17B10Q99714 261 aaKnown RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 SYNGR2O43760 224 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 CBR3O75828 277 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 PGA4P0DJD7 388 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 PGA5P0DJD9 388 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 HTR1DP28221 377 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 ZXDCQ2QGD7 858 aaPredicted RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 ZNF343Q6P1L6 599 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 MOB3BQ86TA1 216 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 ARL6IP6Q8N6S5 226 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 TMEM178AQ8NBL3 297 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 OR4P4Q8NGL7 312 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 NT5CQ8TCD5 201 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 RARRES2Q99969 163 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 SLC7A10Q9NS82 523 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 ST6GALNAC2Q9UJ37 374 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 HDGFL3Q9Y3E1 203 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 CELSR3Q9NYQ7 3312 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 LDLRAD4O15165 306 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 PGA3P0DJD8 388 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 EGR1P18146 543 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 GALP22466 123 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 FUT7Q11130 342 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 ATOH7Q8N100 152 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 OR2V1Q8NHB1 315 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 MOB3AQ96BX8 217 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 FLYWCH2Q96CP2 140 aaKnown RBP7.64□□□□□ -1.19
RTN3-202ENST00000339997 BOD1Q96IK1 185 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 SGK494Q96LW2 274 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 IP6K3Q96PC2 410 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 TECTBQ96PL2 329 aa7.64□□□□□ -1.19
RTN3-202ENST00000339997 TAAR9Q96RI9 348 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms