RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF737O75373 536 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 PPIAL4FP0DN26 164 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 KCNJ3P48549 501 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 EDDM3AQ14507 147 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 HFEQ30201 348 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 KRBOX4Q5JUW0 171 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 SLC35E4Q6ICL7 350 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 C11orf71Q6IPW1 123 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 ZNF880Q6PDB4 577 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 TPRX1Q8N7U7 411 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 PPP1R35Q8TAP8 253 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 SNX22Q96L94 193 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 CCL13Q99616 98 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 SEBOXQ9HB31 216 aaPredicted RBP12.28□□□□□ -0.44
CBX3-201ENST00000337620 KIF25Q9UIL4 384 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 FBXO9Q9UK97 447 aaPredicted RBP12.28□□□□□ -0.44
CBX3-201ENST00000337620 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 PPIAL4AQ9Y536 164 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 MAB21L2Q9Y586 359 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 DCHS2Q6V1P9 2916 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 MEIKINA0A087WXM9 373 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 TRAV38-1A0A0B4J264 116 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 LYNX1G3V0Z9 82 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 LGALS8O00214 317 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 LYNX1P0DP58 116 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 GLIPR1P48060 266 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 ATPAF1Q5TC12 328 aaPredicted RBP12.28□□□□□ -0.44
CBX3-201ENST00000337620 GAPTQ8N292 157 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 PRR18Q8N4B5 295 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 COQ2Q96H96 371 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 OR5H14A6NHG9 310 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 SELLP14151 372 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 COL8A2P25067 703 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 FCGR2CP31995 323 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 MOB1BQ7L9L4 216 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 DTX2Q86UW9 622 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 ZNF561Q8N587 486 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 SEC22CQ9BRL7 303 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 TRAF4Q9BUZ4 470 aaPredicted RBP12.27□□□□□ -0.45
CBX3-201ENST00000337620 LIME1Q9H400 295 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 ZNF665Q9H7R5 613 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.45
CBX3-201ENST00000337620 DSCAMO60469 2012 aa12.27□□□□□ -0.45
CBX3-201ENST00000337620 A0A1B0GW55 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 K7N7A8 449 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 PRAF2O60831 178 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 TK1P04183 234 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L2P0CJ85 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L3P0CJ86 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L4P0CJ87 422 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L5P0CJ88 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L6P0CJ89 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L7P0CJ90 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 VSIG10L2P0DP72 767 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 NFYAP23511 347 aaPredicted RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 GLP1RP43220 463 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 BAMBIQ13145 260 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4L9Q6RFH8 374 aaPredicted RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 DHRS11Q6UWP2 260 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 TMEM185AQ8NFB2 350 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 IL1F10Q8WWZ1 152 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 SDSLQ96GA7 329 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 GAFA1Q96PS6 74 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 GHITMQ9H3K2 345 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 DUX4Q9UBX2 424 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 MEX3AA1L020 520 aaKnown RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 C7orf66A4D0T2 115 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 MGST3O14880 152 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 TMPRSS2O15393 492 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 MECP2P51608 486 aaKnown RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 HERPUD1Q15011 391 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 ZNF660Q6AZW8 331 aaPredicted RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 GLDNQ6ZMI3 551 aaPredicted RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 ZNF788Q6ZQV5 615 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 SLC36A1Q7Z2H8 476 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 FAM216BQ8N7L0 139 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 OR4A4PQ8NGN8 299 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 KIRREL1Q96J84 757 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 SPOCK3Q9BQ16 436 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 NEURL2Q9BR09 285 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 OR51J1Q9H342 316 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 MBNL3Q9NUK0 354 aaKnown RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 KCNIP1Q9NZI2 227 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 MGAT4AQ9UM21 535 aa12.26□□□□□ -0.45
CBX3-201ENST00000337620 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
CBX3-201ENST00000337620 IGKV1-6A0A0C4DH72 117 aa12.25□□□□□ -0.45
CBX3-201ENST00000337620 LY6HO94772 140 aa12.25□□□□□ -0.45
CBX3-201ENST00000337620 CTXN2P0C2S0 81 aa12.25□□□□□ -0.45
CBX3-201ENST00000337620 PGAM2P15259 253 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms