RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 HSPE1-MOB4S4R3N1 261 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 PSMB11A5LHX3 300 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 SH2D7A6NKC9 451 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-202ENST00000337571 E9PI62 339 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 H3BNX3 289 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 MPIG6BO95866 241 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 IGHV3-7P01780 117 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 TMEM11P17152 192 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 GZMHP20718 246 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 SOX2P48431 317 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 PPP3R1P63098 170 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 IL13RA2Q14627 380 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 RPL22L1Q6P5R6 122 aaKnown RBP8.49□□□□□ -1.05
CAPN3-202ENST00000337571 TMPRSS11AQ6ZMR5 421 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 SVOPQ8N4V2 548 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF555Q8NEP9 628 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 OR10A7Q8NGE5 316 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 OR51D1Q8NGF3 324 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 OR52I1Q8NGK6 324 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 OR10X1Q8NGY0 326 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 OR56B4Q8NH76 319 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 GPR148Q8TDV2 347 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 DPF1Q92782 380 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
CAPN3-202ENST00000337571 KIRREL1Q96J84 757 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 METTL9Q9H1A3 318 aa8.49□□□□□ -1.05
CAPN3-202ENST00000337571 PAK1IP1Q9NWT1 392 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-202ENST00000337571 TRAV24A0A0B4J272 114 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 GABRPO00591 440 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 IL1AP01583 271 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 AMY1AP04745 511 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 AMY2AP04746 511 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 SNRNP70P08621 437 aaKnown RBP8.48□□□□□ -1.05
CAPN3-202ENST00000337571 GABRB1P18505 474 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF93P35789 620 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-202ENST00000337571 GNG10P50151 68 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 GTF2A1P52655 376 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-202ENST00000337571 SLC35B1P78383 322 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 HNF4GQ14541 408 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 TCTEX1D4Q5JR98 221 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 OSR2Q8N2R0 312 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 DRAM1Q8N682 238 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 OR13A1Q8NGR1 328 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 OR10K1Q8NGX5 313 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 RFESDQ8TAC1 157 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 MRGPRDQ8TDS7 321 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 CHPT1Q8WUD6 406 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 LEAP2Q969E1 77 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 DPCDQ9BVM2 203 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-202ENST00000337571 JAM3Q9BX67 310 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 GPR61Q9BZJ8 451 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 TMEM138Q9NPI0 162 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 MRPS18AQ9NVS2 196 aaKnown RBP8.48□□□□□ -1.05
CAPN3-202ENST00000337571 TAS2R4Q9NYW5 299 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 PSG11Q9UQ72 335 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 ST3GAL6Q9Y274 331 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
CAPN3-202ENST00000337571 IRGMA1A4Y4 181 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 NPIPB11E5RHQ5 1161 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 E9PQ18 207 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF780AO75290 641 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-202ENST00000337571 OR7C1O76099 320 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-202ENST00000337571 CDRT1O95170 752 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
CAPN3-202ENST00000337571 CGB3P0DN86 165 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 CGB7P0DN87 165 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 MED21Q13503 144 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 PIGYQ3MUY2 71 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 MOB3BQ86TA1 216 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF329Q86UD4 541 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 FOXRED2Q8IWF2 684 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 SUMF2Q8NBJ7 301 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 OR52N1Q8NH53 320 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 NEK7Q8TDX7 302 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 TMEM106AQ96A25 262 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF649Q9BS31 505 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 LINC00574Q9H8X3 128 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 S100A14Q9HCY8 104 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 ZFP57Q9NU63 452 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 CHCHD3Q9NX63 227 aaKnown RBP8.47□□□□□ -1.05
CAPN3-202ENST00000337571 CKLFQ9UBR5 152 aa8.47□□□□□ -1.05
CAPN3-202ENST00000337571 TMEM30CPA0ZSE6 113 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A18PA6NE21 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A16PA6NEW6 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A20PA6NIJ5 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A9PA6NNJ1 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 NCBP2LA6PVI3 153 aaKnown RBP8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A12PA8MX19 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A5PA8MXJ8 464 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 NUDT19A8MXV4 375 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FGF16O43320 207 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 BAG2O95816 211 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 IGKV1D-33P01593 117 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 IGKV1-33P01594 117 aa8.46□□□□□ -1.06
CAPN3-202ENST00000337571 FAM90A15PP0C7V4 464 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms