RNA–Protein interactions for RNA: ENST00000334983.9

CMTM7-201, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM7, Length 2,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-201ENST00000334983 SHANK1Q9Y566 2161 aa16.3■□□□□ 0.2
CMTM7-201ENST00000334983 URB1O60287 2271 aaKnown RBP16.3■□□□□ 0.2
CMTM7-201ENST00000334983 PIGBOS1A0A0B4J2F0 54 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 CLEC18AA5D8T8 446 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 UCP2P55851 309 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 HAGHLQ6PII5 290 aaPredicted RBP16.29■□□□□ 0.2
CMTM7-201ENST00000334983 NUFIP2Q7Z417 695 aaKnown RBP16.29■□□□□ 0.2
CMTM7-201ENST00000334983 TBC1D26Q86UD7 250 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 SPACA3Q8IXA5 215 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 CLEC18CQ8NCF0 446 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 NANOS1Q8WY41 292 aaKnown RBP16.29■□□□□ 0.2
CMTM7-201ENST00000334983 PKIBQ9C010 78 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 TMEM231Q9H6L2 316 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 J3QW42 95 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 HEXAP06865 529 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 GLI4P10075 376 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 CD46P15529 392 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 GNG3P63215 75 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 IL24Q13007 206 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 ZCCHC14Q8WYQ9 949 aaKnown RBP16.29■□□□□ 0.2
CMTM7-201ENST00000334983 C11orf1Q9H5F2 150 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 IFT22Q9H7X7 185 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 ZDHHC8Q9ULC8 765 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 UBE2J1Q9Y385 318 aaPredicted RBP16.29■□□□□ 0.2
CMTM7-201ENST00000334983 FAM96BQ9Y3D0 163 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 ZFHX4Q86UP3 3567 aa16.29■□□□□ 0.2
CMTM7-201ENST00000334983 SCTP09683 121 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 FLI1Q01543 452 aaPredicted RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 MEX3BQ6ZN04 569 aaKnown RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 ZNF695Q8IW36 515 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 OR1K1Q8NGR3 316 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 HS3ST6Q96QI5 342 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 USB1Q9BQ65 265 aaKnown RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 LUZP4Q9P127 313 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 RCL1Q9Y2P8 373 aaKnown RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 FREM1Q5H8C1 2179 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 SLC22A20A6NK97 555 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 PVALBP20472 110 aaPredicted RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 HERPUD1Q15011 391 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 HMGN3Q15651 99 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 FAM76BQ5HYJ3 339 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 FBXW9Q5XUX1 488 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 BATF2Q8N1L9 274 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 IL22RA2Q969J5 263 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 WFDC1Q9HC57 220 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 LHX6Q9UPM6 363 aa16.28■□□□□ 0.2
CMTM7-201ENST00000334983 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
CMTM7-201ENST00000334983 ANKRD11Q6UB99 2663 aaPredicted RBP16.27■□□□□ 0.2
CMTM7-201ENST00000334983 FAM157AC9JC47 383 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 H7C2Y5 167 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 NKX2-8O15522 239 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 SYNGR1O43759 233 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 IL18BPO95998 194 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 SFTA3P0C7M3 94 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 UCP1P25874 307 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 NKX2-1P43699 371 aaPredicted RBP16.27■□□□□ 0.2
CMTM7-201ENST00000334983 SPIN3Q5JUX0 258 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 ZNF818PQ6ZRF7 136 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 CMTM1Q8IZ96 169 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 SELENOHQ8IZQ5 122 aaKnown RBP16.27■□□□□ 0.2
CMTM7-201ENST00000334983 NEK7Q8TDX7 302 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 SECTM1Q8WVN6 248 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 BCL2L2Q92843 193 aaPredicted RBP16.27■□□□□ 0.2
CMTM7-201ENST00000334983 BOD1Q96IK1 185 aa16.27■□□□□ 0.2
CMTM7-201ENST00000334983 NKX2-6A6NCS4 301 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 TSPAN9O75954 239 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 PRKACAP17612 351 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 WNT5AP41221 380 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 ATP1A1-AS1Q5TC04 95 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 ZNF880Q6PDB4 577 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 GAPTQ8N292 157 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 OR2C3Q8N628 320 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 SUMF2Q8NBJ7 301 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 BSCL2Q96G97 398 aaPredicted RBP16.26■□□□□ 0.19
CMTM7-201ENST00000334983 KIRREL1Q96J84 757 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 PRSS50Q9UI38 385 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 PRELID1Q9Y255 219 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 TSPAN15O95858 294 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 MMP9P14780 707 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 VDAC1P21796 283 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 CD80P33681 288 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 HFEQ30201 348 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 FAM58AQ8N1B3 248 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 MRPL30Q8TCC3 161 aaKnown RBP16.26■□□□□ 0.19
CMTM7-201ENST00000334983 WDYHV1Q96HA8 205 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 IL36RNQ9UBH0 155 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 ACACBO00763 2458 aa16.26■□□□□ 0.19
CMTM7-201ENST00000334983 TPRP12270 2363 aaKnown RBP16.26■□□□□ 0.19
CMTM7-201ENST00000334983 WNT2P09544 360 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 OR8U9P0C7N5 309 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
CMTM7-201ENST00000334983 NHLH2Q02577 135 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 ZNF266Q14584 549 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 TSC22D1Q15714 1073 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 TMEM88Q6PEY1 159 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 KDF1Q8NAX2 398 aaPredicted RBP16.25■□□□□ 0.19
CMTM7-201ENST00000334983 OR5D13Q8NGL4 314 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 OR8U1Q8NH10 309 aa16.25■□□□□ 0.19
CMTM7-201ENST00000334983 WNT2BQ93097 391 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms