RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TMEM229BQ8NBD8 167 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SIGLEC11Q96RL6 698 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 PAXXQ9BUH6 204 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 TIMM22Q9Y584 194 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 LIPT2A6NK58 231 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 NGFP01138 241 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SGCBQ16585 318 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 TFAP2BQ92481 460 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 WDR92Q96MX6 357 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR2H1Q9GZK4 316 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 NXT2Q9NPJ8 142 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPATCH2LQ9NWQ4 482 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 LSM2Q9Y333 95 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SELENOKQ9Y6D0 94 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SHPRHQ149N8 1683 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 GLULP15104 373 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 WDR5P61964 334 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 TNFAIP6P98066 277 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR11G2Q8NGC1 345 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 WNT8BQ93098 351 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 TEPSINQ96N21 525 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 CRTAC1Q9NQ79 661 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF195O14628 629 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 SELPP16109 830 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 KLRK1P26718 216 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 CDKN1AP38936 164 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 CLDN12P56749 244 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 STAC2Q6ZMT1 411 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR2I1PQ8NGU4 316 aa5.4□□□□□ -1.55
CDC42BPA-201ENST00000334218 A8MWL6 223 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 IDSB3KWA1 339 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GAPDHP04406 335 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CCL5P13501 91 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CRYBB3P26998 211 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MEF2BQ02080 365 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GSG1Q2KHT4 349 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 NKAPP1Q8N9T2 125 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SPTBN2O15020 2390 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TNFP01375 233 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 INHBBP09529 407 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ERVK11-1P61568 191 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SELENOTP62341 195 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ERHP84090 104 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CXCL17Q6UXB2 119 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 KLK6Q92876 244 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM45BQ96B21 275 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SFXN3Q9BWM7 321 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MFRPQ9BY79 579 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SS18L2Q9UHA2 77 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 NEUROG3Q9Y4Z2 214 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PCDH15Q96QU1 1955 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GAGE12HA6NDE8 117 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF815PA8K554 130 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GGTLC3B5MD39 225 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 HBQ1P09105 142 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 FCGR2AP12318 317 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CLDN2P57739 230 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 HSPE1P61604 102 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF595Q8IYB9 648 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 RSRP1Q9BUV0 290 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD244Q9BZW8 370 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC52A3Q9NQ40 469 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM59LQ9UK28 342 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ASPDHA6ND91 283 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CA6P23280 308 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MPLP40238 635 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PYY3Q5JQD4 70 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM25Q86YD3 366 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC22A24Q8N4F4 322 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CMTM7Q96FZ5 175 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 YPEL4Q96NS1 127 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SDHCQ99643 169 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPR88Q9GZN0 384 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 RIMS3Q9UJD0 308 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 HS3ST2Q9Y278 367 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 AMMECR1Q9Y4X0 333 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 NHSL1Q5SYE7 1610 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PHIPQ8WWQ0 1821 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 MGST3O14880 152 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 RRADP55042 308 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PRSS54Q6PEW0 395 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 FAM219AQ8IW50 185 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 GPR146Q96CH1 333 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 KLF13Q9Y2Y9 288 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ATRNL1Q5VV63 1379 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 FPR2P25090 351 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 UCP1P25874 307 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC25A11Q02978 314 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 INCA1Q0VD86 236 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 PAFAH1B3Q15102 231 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF788Q6ZQV5 615 aa5.39□□□□□ -1.55
CDC42BPA-201ENST00000334218 CILP2Q8IUL8 1156 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms