RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
HDAC6-201ENST00000334136 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
HDAC6-201ENST00000334136 RBMXL3Q8N7X1 1067 aaKnown RBP10.26□□□□□ -0.77
HDAC6-201ENST00000334136 LILRB1Q8NHL6 650 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-201ENST00000334136 SOSTQ9BQB4 213 aa10.26□□□□□ -0.77
HDAC6-201ENST00000334136 OR5AC2Q9NZP5 309 aa10.26□□□□□ -0.77
HDAC6-201ENST00000334136 A0A1W2PP11 408 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 TRAF3IP2O43734 574 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-201ENST00000334136 RAMP1O60894 148 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 PNPP00491 289 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 SMIM6P0DI80 62 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 PSMB3P49720 205 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 SULT1A1P50225 295 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 OR2AE1Q8NHA4 323 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 TVP23CQ96ET8 276 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 ALX4Q9H161 411 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-201ENST00000334136 ARV1Q9H2C2 271 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 MOB1AQ9H8S9 216 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 CDH23Q9H251 3354 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 GAS1P54826 345 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 CLDN18P56856 261 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 P2RY6Q15077 328 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 RAB35Q15286 201 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 ZNF485Q8NCK3 441 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 FAM234AQ9H0X4 552 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 KCNK7Q9Y2U2 307 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 IGFL3Q6UXB1 125 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 MRGPRGQ86SM5 289 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 OR5AS1Q8N127 324 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 KLHDC3Q9BQ90 382 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 PRSS50Q9UI38 385 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 ABCA4P78363 2273 aa10.25□□□□□ -0.77
HDAC6-201ENST00000334136 A0A087WV48 116 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 CDC14BO60729 498 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 NRASP01111 189 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 HNF1AP20823 631 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 RPS16P62249 146 aaKnown RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 LSM6P62312 80 aaKnown RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 HIKESHIQ53FT3 197 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 LINC00114Q6XXX2 140 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 NUFIP2Q7Z417 695 aaKnown RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 ZNRF4Q8WWF5 429 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 GPX7Q96SL4 187 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 OPA3Q9H6K4 179 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 TMEM38BQ9NVV0 291 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 PPP1R3CQ9UQK1 317 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 A0A1W2PNV4 684 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 ZNF345Q14585 488 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 PNLIPRP3Q17RR3 467 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 OR8U1Q8NH10 309 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 HEXA-AS1Q9H8Q6 139 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 SPRR3Q9UBC9 169 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 A8MXE2 369 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 A8MXK9 166 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 LMX1BO60663 402 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 POLR2GP62487 172 aaKnown RBP eCLIP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 ACSF3Q4G176 576 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 TFAP2EQ6VUC0 442 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 OR4F5Q8NH21 305 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 ADAT3Q96EY9 351 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-201ENST00000334136 OR4F4Q96R69 305 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 DNAJB11Q9UBS4 358 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 ATRXP46100 2492 aa10.24□□□□□ -0.77
HDAC6-201ENST00000334136 MPDZO75970 2070 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 MST1P26927 711 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 FAM185AQ8N0U4 392 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 APOBEC3DQ96AK3 386 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-201ENST00000334136 GP6Q9HCN6 339 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 INTS1Q8N201 2190 aaKnown RBP10.23□□□□□ -0.77
HDAC6-201ENST00000334136 AKAP6Q13023 2319 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 GTF3C1Q12789 2109 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 EFNA2O43921 213 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 MSMO1Q15800 293 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 H3F3AP84243 136 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 SPATA46Q5T0L3 261 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 DRAM2Q6UX65 266 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 POM121Q96HA1 1249 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 AP1S3Q96PC3 154 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 NMES1Q9C002 83 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 ESRP2Q9H6T0 727 aaKnown RBP10.23□□□□□ -0.77
HDAC6-201ENST00000334136 DOCK10Q96BY6 2186 aa10.23□□□□□ -0.77
HDAC6-201ENST00000334136 EIF3GO75821 320 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC6-201ENST00000334136 RNFT1Q5M7Z0 435 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 DEGS2Q6QHC5 323 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 OR10J5Q8NHC4 309 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 FREM3P0C091 2139 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 SOX15O60248 233 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 NPIPB7O75200 414 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 CST2P09228 141 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 PGA4P0DJD7 388 aa10.22□□□□□ -0.77
HDAC6-201ENST00000334136 PGA3P0DJD8 388 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms