RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 OR11H6Q8NGC7 330 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 NEK7Q8TDX7 302 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 MEGF9Q9H1U4 602 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 TMEM133Q9H2Q1 129 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 TNFRSF19Q9NS68 423 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
LIMS1-201ENST00000332345 V9GY05 133 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 TRAV1-2A0A0B4J238 106 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 TMEM89A2RUT3 159 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 SLC17A2O00624 439 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 BPNT1O95861 308 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 MPIG6BO95866 241 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 RSBN1Q5VWQ0 802 aaPredicted RBP11.4□□□□□ -0.58
LIMS1-201ENST00000332345 RAB12Q6IQ22 244 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 RTN4RL2Q86UN3 420 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 PLPPR1Q8TBJ4 325 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 FAM46BQ96A09 425 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 MALSU1Q96EH3 234 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 Q96M66 194 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 ZNF581Q9P0T4 197 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 ZNRD1Q9P1U0 126 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 TBL2Q9Y4P3 447 aaKnown RBP11.4□□□□□ -0.58
LIMS1-201ENST00000332345 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
LIMS1-201ENST00000332345 IGHV2-26A0A0B4J1V2 119 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 MMP23AO75900 390 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 TNFAIP8O95379 198 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 IGHV4-59P01825 116 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 CGB3P0DN86 165 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 CGB7P0DN87 165 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 HKR1P10072 659 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 ARSBP15848 533 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 MYL9P24844 172 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 GLP1RP43220 463 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 FOXL1Q12952 345 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 RAB11BQ15907 218 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 AANATQ16613 207 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 PRAMEF5Q5TYX0 476 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 ZNF626Q68DY1 528 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 DYRK2Q92630 601 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 NEDD4LQ96PU5 975 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 CHIAQ9BZP6 476 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 RCC2Q9P258 522 aaKnown RBP11.39□□□□□ -0.59
LIMS1-201ENST00000332345 SSR3Q9UNL2 185 aa11.39□□□□□ -0.59
LIMS1-201ENST00000332345 A0A087WXM4 84 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 FAM181BA6NEQ2 426 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 ODF3BA8MYP8 253 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 TOR1AO14656 332 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 PDCD6O75340 191 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 CA11O75493 328 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 MT-ND4P03905 459 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 OMGP23515 440 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 FGF9P31371 208 aaPredicted RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 COMPP49747 757 aaPredicted RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 PRRX1P54821 245 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 RPS27AP62979 156 aaKnown RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 C17orf58Q2M2W7 97 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 SYT6Q5T7P8 510 aaPredicted RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 MINOS1Q5TGZ0 78 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 C22orf42Q6IC83 251 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 ZNF497Q6ZNH5 498 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 OR2W3Q7Z3T1 314 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 OR13A1Q8NGR1 328 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 ZNF596Q8TC21 504 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 MRGPRDQ8TDS7 321 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 GFI1Q99684 422 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 SSX3Q99909 188 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 URM1Q9BTM9 101 aaKnown RBP11.38□□□□□ -0.59
LIMS1-201ENST00000332345 LINC00574Q9H8X3 128 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 ETAA1Q9NY74 926 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 CALYQ9NYX4 217 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 STUB1Q9UNE7 303 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
LIMS1-201ENST00000332345 TMEM14DPA8MWL7 114 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 IL1AP01583 271 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 NFYBP25208 207 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 HTR1DP28221 377 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 QRFPP83859 136 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 P2RY14Q15391 338 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 NEDD8Q15843 81 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 OR10K2Q6IF99 312 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 SLC16A12Q6ZSM3 486 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 LHFPL4Q7Z7J7 247 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 TSPAN14Q8NG11 270 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 RFESDQ8TAC1 157 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 NDNFQ8TB73 568 aa11.37□□□□□ -0.59
LIMS1-201ENST00000332345 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms