RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
LRRC28-202ENST00000331450 UBE2J1Q9Y385 318 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-202ENST00000331450 MEIKINA0A087WXM9 373 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 MEX3AA1L020 520 aaKnown RBP13.17□□□□□ -0.3
LRRC28-202ENST00000331450 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 DPPA5A6NC42 116 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 C17orf98A8MV24 154 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 MFNGO00587 321 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 SCGNO76038 276 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 RBP4P02753 201 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 MT-ND4P03905 459 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF728P0DKX0 622 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 METTL11BQ5VVY1 283 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 CMTM4Q8IZR5 234 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF714Q96N38 554 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
LRRC28-202ENST00000331450 PLEKHJ1Q9NW61 149 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 ETAA1Q9NY74 926 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 TAS2R3Q9NYW6 316 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 OR6C3Q9NZP0 311 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 NSD1Q96L73 2696 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-202ENST00000331450 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
LRRC28-202ENST00000331450 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 TOX4O94842 621 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 NAPSAO96009 420 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
LRRC28-202ENST00000331450 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 Q6ZPA2 131 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 Q6ZTK2 550 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 SAMD12Q8N8I0 201 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
LRRC28-202ENST00000331450 AP3S1Q92572 193 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 NDUFA13Q9P0J0 144 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
LRRC28-202ENST00000331450 A0A0A6YYH2 397 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 A6NJ64 397 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-202ENST00000331450 SOX6P35712 828 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 GLP1RP43220 463 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 C17orf58Q2M2W7 97 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 KLF17Q5JT82 389 aaPredicted RBP13.15□□□□□ -0.3
LRRC28-202ENST00000331450 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 VMO1Q7Z5L0 202 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 PCGF1Q9BSM1 259 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
LRRC28-202ENST00000331450 GAL3ST2Q9H3Q3 398 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 METTL8Q9H825 291 aaKnown RBP13.15□□□□□ -0.3
LRRC28-202ENST00000331450 LINC00574Q9H8X3 128 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
LRRC28-202ENST00000331450 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
LRRC28-202ENST00000331450 TRBV6-6A0A0A6YYG2 114 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 TRAV39A0A0B4J263 110 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 TRAV40A0A0B4J280 105 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 CLPXO76031 633 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 APOA1P02647 267 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 EIF4EP06730 217 aaKnown RBP13.14□□□□□ -0.31
LRRC28-202ENST00000331450 PRTN3P24158 256 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 DLX1P56177 255 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 ZNF880Q6PDB4 577 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 MRGPRDQ8TDS7 321 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 SIRT7Q9NRC8 400 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
LRRC28-202ENST00000331450 KBTBD11-OT1A0A1B0GTJ5 212 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 HPGDSO60760 199 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 MMP23AO75900 390 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
LRRC28-202ENST00000331450 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 GNB3P16520 340 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 HOXB4P17483 251 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-202ENST00000331450 HNF1AP20823 631 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 CDK2P24941 298 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 SSTR5P35346 364 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 ARL6IP1Q15041 203 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 ZNF260Q3ZCT1 412 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 HCP5Q6MZN7 132 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 MZT2AQ6P582 158 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 HEPN1Q6WQI6 88 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 ZNF565Q8N9K5 539 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 CCDC107Q8WV48 283 aa13.13□□□□□ -0.31
LRRC28-202ENST00000331450 DGCR14Q96DF8 476 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms