RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 FFAR1O14842 300 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 APCSP02743 223 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 LINC00862A6NCI5 91 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 RPL24P83731 157 aaKnown RBP18.47■□□□□ 0.55
RNF40-201ENST00000324685 ZNF345Q14585 488 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 CLPPQ16740 277 aaPredicted RBP18.47■□□□□ 0.55
RNF40-201ENST00000324685 SLC35E4Q6ICL7 350 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 TGIF2LYQ8IUE0 185 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 OR4X1Q8NH49 305 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 PIPOXQ9P0Z9 390 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 OR4C45A6NMZ5 311 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 BGLAPP02818 100 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 MOGAT3Q86VF5 341 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 TNFSF14O43557 240 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 HIST1H1EP10412 219 aaKnown RBP18.47■□□□□ 0.55
RNF40-201ENST00000324685 CXCL3P19876 107 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 IRF3Q14653 427 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 SSMEM1Q8WWF3 244 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 ISOC2Q96AB3 205 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 SNX22Q96L94 193 aa18.47■□□□□ 0.55
RNF40-201ENST00000324685 MYO5AQ9Y4I1 1855 aaKnown RBP18.47■□□□□ 0.55
RNF40-201ENST00000324685 CTXND1A0A1B0GTU2 59 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 PAGE4O60829 102 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 SEC11BP0C7V7 166 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 OR4D11Q8NGI4 311 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 DYRK2Q92630 601 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 FLYWCH2Q96CP2 140 aaKnown RBP18.46■□□□□ 0.55
RNF40-201ENST00000324685 GPR35Q9HC97 309 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 FUT9Q9Y231 359 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 H3BQ15 152 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 CD40P25942 277 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 OR5A2Q8NGI9 324 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 RNF133Q8WVZ7 376 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 HEXA-AS1Q9H8Q6 139 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 CDX4O14627 284 aaPredicted RBP18.46■□□□□ 0.55
RNF40-201ENST00000324685 TMEM255AQ5JRV8 349 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 ASB5Q8WWX0 329 aa18.46■□□□□ 0.55
RNF40-201ENST00000324685 CDIPTO14735 213 aa18.46■□□□□ 0.54
RNF40-201ENST00000324685 PITX3O75364 302 aa18.46■□□□□ 0.54
RNF40-201ENST00000324685 RPLP1P05386 114 aaKnown RBP18.46■□□□□ 0.54
RNF40-201ENST00000324685 CBLN2Q8IUK8 224 aa18.46■□□□□ 0.54
RNF40-201ENST00000324685 NKX2-6A6NCS4 301 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 MYOZ3Q8TDC0 251 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 CRXO43186 299 aaPredicted RBP18.45■□□□□ 0.54
RNF40-201ENST00000324685 IGF2P01344 180 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 TRIP6Q15654 476 aaKnown RBP18.45■□□□□ 0.54
RNF40-201ENST00000324685 MRPL54Q6P161 138 aaKnown RBP18.45■□□□□ 0.54
RNF40-201ENST00000324685 TEPPQ6URK8 271 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 SMIM12Q96EX1 92 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 TMEM38BQ9NVV0 291 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 TCFL5Q9UL49 500 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 TMEM50BP56557 158 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 HES3Q5TGS1 186 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 RNF122Q9H9V4 155 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 SAP30LQ9HAJ7 183 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 PITPNC1Q9UKF7 332 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 TCRBV16S1A1N1A0A5B0 115 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 B2MP61769 119 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 ADAD2Q8NCV1 583 aaKnown RBP18.45■□□□□ 0.54
RNF40-201ENST00000324685 KCNMB2Q9Y691 235 aa18.45■□□□□ 0.54
RNF40-201ENST00000324685 C1QAP02745 245 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 DLX1P56177 255 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 C8orf82Q6P1X6 216 aaPredicted RBP18.44■□□□□ 0.54
RNF40-201ENST00000324685 CHST5Q9GZS9 411 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 C1orf210Q8IVY1 113 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 STARD4Q96DR4 205 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 RPP25Q9BUL9 199 aaKnown RBP18.44■□□□□ 0.54
RNF40-201ENST00000324685 LGALSLQ3ZCW2 172 aaPredicted RBP18.44■□□□□ 0.54
RNF40-201ENST00000324685 BPIFA4PQ86YQ2 179 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 MRGPRFQ96AM1 343 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 SNRNP40Q96DI7 357 aaKnown RBP18.44■□□□□ 0.54
RNF40-201ENST00000324685 HOGA1Q86XE5 327 aa18.44■□□□□ 0.54
RNF40-201ENST00000324685 CLDN18P56856 261 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 PKIAP61925 76 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 C1QL3Q5VWW1 255 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 PTX4Q96A99 478 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 SLC25A33Q9BSK2 321 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 DAOP14920 347 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 MAGEA5P43359 124 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 PRSS12P56730 875 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 SRSF9Q13242 221 aaKnown RBP eCLIP18.43■□□□□ 0.54
RNF40-201ENST00000324685 RAB33BQ9H082 229 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 C21orf140B9A014 251 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 SYNGR1O43759 233 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 RHBDL1O75783 438 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 MGPP08493 103 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 LYZL2Q7Z4W2 148 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 HARBI1Q96MB7 349 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 NPIPB8E9PQR5 432 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 VSIG8P0DPA2 414 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 CD99P14209 185 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 HOXA6P31267 233 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 TINAGQ9UJW2 476 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 M0R296 226 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 OR1L8Q8NGR8 309 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 ADIPOR1Q96A54 375 aa18.43■□□□□ 0.54
RNF40-201ENST00000324685 SNURFLB1AK76 121 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 DNPH1O43598 174 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 NPY1RP25929 384 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms