RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DPCDQ9BVM2 203 aaPredicted RBP14.22□□□□□ -0.13
TPM1-203ENST00000317516 IFT22Q9H7X7 185 aa14.22□□□□□ -0.13
TPM1-203ENST00000317516 LINC00574Q9H8X3 128 aa14.22□□□□□ -0.13
TPM1-203ENST00000317516 SIRT4Q9Y6E7 314 aaPredicted RBP14.22□□□□□ -0.13
TPM1-203ENST00000317516 TET2Q6N021 2002 aaPredicted RBP14.22□□□□□ -0.13
TPM1-203ENST00000317516 EFCAB10A6NFE3 127 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 LY6LH3BQJ8 138 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 J3QR06 171 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 TAS2R43P59537 309 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 ST3GAL4Q11206 333 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 Q499Y3 187 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 RSBN1Q5VWQ0 802 aaPredicted RBP14.21□□□□□ -0.13
TPM1-203ENST00000317516 HIST2H2BDQ6DRA6 164 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 DMKNQ6E0U4 476 aaPredicted RBP14.21□□□□□ -0.13
TPM1-203ENST00000317516 Q6ZS46 218 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 LYG1Q8N1E2 194 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 SUMF2Q8NBJ7 301 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 OR5AU1Q8NGC0 362 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 MRGPRDQ8TDS7 321 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 WIPF2Q8TF74 440 aaPredicted RBP14.21□□□□□ -0.13
TPM1-203ENST00000317516 R3HDM4Q96D70 268 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 CITED2Q99967 270 aaPredicted RBP14.21□□□□□ -0.13
TPM1-203ENST00000317516 CLEC2DQ9UHP7 191 aa14.21□□□□□ -0.13
TPM1-203ENST00000317516 DSCAML1Q8TD84 2053 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 TRBV5-5A0A0J9YX44 114 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 GPX5O75715 221 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 GTF2F2P13984 249 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 RBM11P57052 281 aaKnown RBP14.2□□□□□ -0.14
TPM1-203ENST00000317516 ADARB1P78563 741 aaKnown RBP14.2□□□□□ -0.14
TPM1-203ENST00000317516 MADCAM1Q13477 382 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 MPV17LQ2QL34 196 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 ABCA11PQ4W5N1 156 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 THNSL2Q86YJ6 484 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 RFESDQ8TAC1 157 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 GGHQ92820 318 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 TOMM40LQ969M1 308 aa14.2□□□□□ -0.14
TPM1-203ENST00000317516 ZNF184Q99676 751 aaPredicted RBP14.2□□□□□ -0.14
TPM1-203ENST00000317516 CNOT2Q9NZN8 540 aaKnown RBP14.2□□□□□ -0.14
TPM1-203ENST00000317516 LPLP06858 475 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 IGFBP3P17936 291 aaPredicted RBP14.19□□□□□ -0.14
TPM1-203ENST00000317516 SERPINA2P20848 420 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 RCN1Q15293 331 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 LTC4SQ16873 150 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 ATAD3CQ5T2N8 411 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 C8orf59Q8N0T1 100 aaPredicted RBP14.19□□□□□ -0.14
TPM1-203ENST00000317516 PLPPR1Q8TBJ4 325 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 PSG11Q9UQ72 335 aa14.19□□□□□ -0.14
TPM1-203ENST00000317516 TMEM30CPA0ZSE6 113 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 G3V4G9 280 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 GEMIN2O14893 280 aaKnown RBP14.18□□□□□ -0.14
TPM1-203ENST00000317516 LALBAP00709 142 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 CAPGP40121 348 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 RAB7AP51149 207 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 CD83Q01151 205 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 TMEM95Q3KNT9 176 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 SLC22A6Q4U2R8 563 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 CDH26Q8IXH8 852 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 STX19Q8N4C7 294 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 OR13C5Q8NGS8 318 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 OR10X1Q8NGY0 326 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 NEK7Q8TDX7 302 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 MRPS24Q96EL2 167 aaKnown RBP14.18□□□□□ -0.14
TPM1-203ENST00000317516 VCXQ9H320 206 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 SPACA1Q9HBV2 294 aa14.18□□□□□ -0.14
TPM1-203ENST00000317516 KIAA2026Q5HYC2 2103 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 IGHV3-7P01780 117 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 FSTP19883 344 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 SAMD5Q5TGI4 173 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 OR8H3Q8N146 312 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 ZFP41Q8N8Y5 198 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 ZNF485Q8NCK3 441 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 OR4X2Q8NGF9 303 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 THRSPQ92748 146 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 LEAP2Q969E1 77 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 ORAI1Q96D31 301 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 PGLYRP3Q96LB9 341 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 RAB9BQ9NP90 201 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 MOB4Q9Y3A3 225 aa14.17□□□□□ -0.14
TPM1-203ENST00000317516 TCRBV4S1A1TA0A5B7 111 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A18PA6NE21 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A16PA6NEW6 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A20PA6NIJ5 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A12PA8MX19 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A5PA8MXJ8 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 MYL12BO14950 172 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 CD1AP06126 327 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A15PP0C7V4 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A13PP0C7W8 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A14PP0C7W9 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 FAM90A24PP0C7X0 464 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 SSTR5P35346 364 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 GNG10P50151 68 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 RPS11P62280 158 aaKnown RBP eCLIP14.16□□□□□ -0.14
TPM1-203ENST00000317516 HES1Q14469 280 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 BEAN1Q3B7T3 259 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 C9orf152Q5JTZ5 239 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 UTF1Q5T230 341 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 JAGN1Q8N5M9 183 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms