RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 NDUFB8O95169 186 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 ZBTB25P24278 435 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
HOXA3-201ENST00000317201 CAMLGP49069 296 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 LHX2P50458 406 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 ARG2P78540 354 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 SLC9A3R2Q15599 337 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 Q499Y3 187 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF880Q6PDB4 577 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 TMEM251Q8N6I4 163 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 OR51D1Q8NGF3 324 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 TUBG2Q9NRH3 451 aa12.75□□□□□ -0.37
HOXA3-201ENST00000317201 EP300Q09472 2414 aaPredicted RBP12.74□□□□□ -0.37
HOXA3-201ENST00000317201 C22orf46C9J442 243 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 SRSF10O75494 262 aaKnown RBP12.74□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF708P17019 499 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 PPP1CCP36873 323 aaKnown RBP12.74□□□□□ -0.37
HOXA3-201ENST00000317201 CLDN15P56746 228 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 PLGLB1Q02325 96 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 COL10A1Q03692 680 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 LRRC69Q6ZNQ3 347 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 C20orf196Q8IYI0 205 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 OR4X1Q8NH49 305 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 SDSLQ96GA7 329 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 FOXN4Q96NZ1 517 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF430Q9H8G1 570 aaPredicted RBP12.74□□□□□ -0.37
HOXA3-201ENST00000317201 LRP12Q9Y561 859 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 CEACAM4O75871 244 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 LMO1P25800 156 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 VAMP2P63027 116 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 MMDQ15546 238 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF766Q5HY98 468 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
HOXA3-201ENST00000317201 CATSPERDQ86XM0 798 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 TMEM45BQ96B21 275 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 R4GMQ9 66 aa12.74□□□□□ -0.37
HOXA3-201ENST00000317201 CXCL13O43927 109 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 ADRA2CP18825 462 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 SLC6A9P48067 706 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 CLDN18P56856 261 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 GBGT1Q8N5D6 347 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 PBDC1Q9BVG4 233 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
HOXA3-201ENST00000317201 PAM16Q9Y3D7 125 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 IGHV3-15A0A0B4J1V0 119 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 ALDH3B1P43353 468 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 MAGEA5P43359 124 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 EIF1AXP47813 144 aaKnown RBP12.73□□□□□ -0.37
HOXA3-201ENST00000317201 CLEC12BQ2HXU8 276 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 LDLRAD2Q5SZI1 272 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 STPG4Q8N801 248 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 OR52A1Q9UKL2 312 aa12.73□□□□□ -0.37
HOXA3-201ENST00000317201 WT1P19544 449 aaPredicted RBP12.72□□□□□ -0.37
HOXA3-201ENST00000317201 MMP16P51512 607 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 TAS2R19P59542 299 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 WDR38Q5JTN6 314 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 CARD17Q5XLA6 110 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF627Q7L945 461 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 CACNA1CQ13936 2221 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 TRBV5-7A0A0A0MS05 114 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 WNT11O96014 354 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 PPBPP02775 128 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 ISG15P05161 165 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 GUCA1AP43080 201 aaPredicted RBP12.72□□□□□ -0.37
HOXA3-201ENST00000317201 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
HOXA3-201ENST00000317201 RAB32Q13637 225 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 OR4C5Q8NGB2 326 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 OR2AJ1Q8NGZ0 328 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 SLAMF6Q96DU3 332 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 SLC35E1Q96K37 410 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 LHFPL6Q9Y693 200 aa12.72□□□□□ -0.37
HOXA3-201ENST00000317201 CTAG2O75638 210 aa12.71□□□□□ -0.37
HOXA3-201ENST00000317201 SRSF6Q13247 344 aaKnown RBP12.71□□□□□ -0.37
HOXA3-201ENST00000317201 SLC25A21Q9BQT8 299 aaPredicted RBP12.71□□□□□ -0.37
HOXA3-201ENST00000317201 ZDHHC11Q9H8X9 412 aa12.71□□□□□ -0.37
HOXA3-201ENST00000317201 FAM166BA8MTA8 275 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 RAB27BO00194 218 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 DHHO43323 396 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 H2BFMP0C1H6 154 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 OR5AC1P0C628 307 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 MMP9P14780 707 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 MSR1P21757 451 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 TUBG1P23258 451 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 AWAT2Q6E213 333 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 STAC2Q6ZMT1 411 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.38
HOXA3-201ENST00000317201 OR4K15Q8NH41 348 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms