RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 DBX1A6NMT0 343 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 G3V3Q6 166 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 SNAPC5O75971 98 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 RPS2P15880 293 aaKnown RBP14.07□□□□□ -0.16
CLCF1-201ENST00000312438 PRDX2P32119 198 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 SORDQ00796 357 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 SRSF4Q08170 494 aaKnown RBP14.07□□□□□ -0.16
CLCF1-201ENST00000312438 HERPUD1Q15011 391 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 ABCA11PQ4W5N1 156 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 SPRNQ5BIV9 151 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 LAMTOR1Q6IAA8 161 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 KCTD9Q7L273 389 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 PLPPR2Q96GM1 343 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 FXYD6Q9H0Q3 95 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 PLSCR3Q9NRY6 295 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 MBNL3Q9NUK0 354 aaKnown RBP14.07□□□□□ -0.16
CLCF1-201ENST00000312438 CACNA1AO00555 2505 aa14.07□□□□□ -0.16
CLCF1-201ENST00000312438 IGKV1-6A0A0C4DH72 117 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 TEX13DA0A0J9YY54 714 aaPredicted RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 SHISA9B4DS77 424 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 ADH4P08319 380 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 PIGPP57054 158 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 ATXN7L3Q14CW9 347 aaPredicted RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 SLC35E4Q6ICL7 350 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 C5orf24Q7Z6I8 188 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 LINC01560Q8TB33 94 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 WDR89Q96FK6 387 aaPredicted RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 DNAJB11Q9UBS4 358 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 KCNIP3Q9Y2W7 256 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 HSPB11Q9Y547 144 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 SPTA1P02549 2419 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 DSPP15924 2871 aaKnown RBP14.06□□□□□ -0.16
CLCF1-201ENST00000312438 TMEM30CPA0ZSE6 113 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 CRYM-AS1A6NIL9 109 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 TUSC2O75896 110 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 CD3EP07766 207 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 PSG2P11465 335 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 EGR1P18146 543 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 SERPINF1P36955 418 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 COL10A1Q03692 680 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 C9orf62Q8N4C0 152 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 OR10J5Q8NHC4 309 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 TMEM246Q9BRR3 403 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 CABLES2Q9BTV7 478 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 RSRP1Q9BUV0 290 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 GCM1Q9NP62 436 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 RNF7Q9UBF6 113 aa14.06□□□□□ -0.16
CLCF1-201ENST00000312438 TRBV6-7A0A0A0MS04 114 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 C17orf100A8MU93 164 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
CLCF1-201ENST00000312438 IFNA2P01563 188 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 CD55P08174 381 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 IFITM2Q01629 132 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 SNTB1Q13884 538 aaKnown RBP14.05□□□□□ -0.16
CLCF1-201ENST00000312438 CD177Q8N6Q3 437 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 BOLLQ8N9W6 283 aaKnown RBP14.05□□□□□ -0.16
CLCF1-201ENST00000312438 RTN4IP1Q8WWV3 396 aaPredicted RBP14.05□□□□□ -0.16
CLCF1-201ENST00000312438 PDCD10Q9BUL8 212 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 RAB18Q9NP72 206 aa14.05□□□□□ -0.16
CLCF1-201ENST00000312438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.04□□□□□ -0.16
CLCF1-201ENST00000312438 TNFRSF1AP19438 455 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 ANKRD55Q3KP44 614 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 DMRTC2Q8IXT2 367 aaPredicted RBP14.04□□□□□ -0.16
CLCF1-201ENST00000312438 OR11L1Q8NGX0 322 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 Q8TCH9 128 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 KCNIP1Q9NZI2 227 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 PAIP2BQ9ULR5 123 aaKnown RBP14.04□□□□□ -0.16
CLCF1-201ENST00000312438 CHD8Q9HCK8 2581 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 TUBAL3A6NHL2 446 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 NPIPB11E5RHQ5 1161 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 E7EQL1 145 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 CD8AP01732 235 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 RBMXP38159 391 aaKnown RBP14.04□□□□□ -0.16
CLCF1-201ENST00000312438 OR3A1P47881 315 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 AESQ08117 197 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 FGL1Q08830 312 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 ZNF565Q8N9K5 539 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 CCDC71LQ8N9Z2 235 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 LILRB1Q8NHL6 650 aaPredicted RBP14.04□□□□□ -0.16
CLCF1-201ENST00000312438 GRPEL2Q8TAA5 225 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 PPP1R35Q8TAP8 253 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 GALNT14Q96FL9 552 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 KIRREL1Q96J84 757 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 GON7Q9BXV9 100 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 SHARPINQ9H0F6 387 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 SLC2A9Q9NRM0 540 aa14.04□□□□□ -0.16
CLCF1-201ENST00000312438 ESPL1Q14674 2120 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 SHANK1Q9Y566 2161 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 IGKV1D-17A0A075B6S4 117 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 TRAV39A0A0B4J263 110 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 FAM25EA8MYX2 175 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 M0R233 179 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 CCSO14618 274 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 GRNP28799 593 aaKnown RBP14.03□□□□□ -0.16
CLCF1-201ENST00000312438 GNRHRP30968 328 aa14.03□□□□□ -0.16
CLCF1-201ENST00000312438 APOBEC3AP31941 199 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms