RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 RSG1Q9BU20 258 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF665Q9H7R5 613 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 CYTL1Q9NRR1 136 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 METTL1Q9UBP6 276 aaKnown RBP11.01□□□□□ -0.65
RETREG3-201ENST00000309428 TECTAO75443 2155 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 GTF3C1Q12789 2109 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 NPIPB7O75200 414 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 DDTP30046 118 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 CDPF1Q6NVV7 123 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF808Q8N4W9 903 aaPredicted RBP11.01□□□□□ -0.65
RETREG3-201ENST00000309428 SLC25A22Q9H936 323 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 FAM206AQ9NX38 181 aa11.01□□□□□ -0.65
RETREG3-201ENST00000309428 DFFBO76075 338 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 NRASP01111 189 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 TRGC1P0CF51 173 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 SELEP16581 610 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 NDUFB7P17568 137 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 RPS23P62266 143 aaKnown RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 PYY3Q5JQD4 70 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 FIP1L1Q6UN15 594 aaKnown RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 MAML2Q8IZL2 1156 aaPredicted RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 OR13D1Q8NGV5 346 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 PSMF1Q92530 271 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF488Q96MN9 340 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 FGF16O43320 207 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 PRF1P14222 555 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 POC1AQ8NBT0 407 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 SRXN1Q9BYN0 137 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 IGKV1D-8A0A087WSZ0 117 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 UBE2L5PA0A1B0GUS4 154 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF320A2RRD8 509 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 PGA3P0DJD8 388 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 ROM1Q03395 351 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 RNF151Q2KHN1 245 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 WDR74Q6RFH5 385 aaPredicted RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 SAP25Q8TEE9 199 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 RTBDNQ9BSG5 229 aaPredicted RBP11□□□□□ -0.65
RETREG3-201ENST00000309428 IER2Q9BTL4 223 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 SERTAD4Q9NUC0 356 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 FUT9Q9Y231 359 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
RETREG3-201ENST00000309428 A0A1B0GTQ1 180 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 C5orf49A4QMS7 147 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 DEDDO75618 318 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 FGF7P21781 194 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 CLN3Q13286 438 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 KHDC3LQ587J8 217 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 CXorf67Q86X51 503 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 BAGE2Q86Y30 109 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 NFAM1Q8NET5 270 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 CCNL2Q96S94 520 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 GPR87Q9BY21 358 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 MUC6Q6W4X9 2439 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 A0A1W2PQD3 144 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 FAM157CP0CG43 387 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF133P52736 654 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 ABHD17BQ5VST6 288 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 WDR5BQ86VZ2 330 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 K7ESF4 209 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 MRPL33O75394 65 aaKnown RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 IGLV3-19P01714 112 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 P2RY1P47900 373 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 CDX1P47902 265 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 FOXG1P55316 489 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 GRB2P62993 217 aaKnown RBP10.99□□□□□ -0.65
RETREG3-201ENST00000309428 OR8G1Q15617 311 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 TEX30Q5JUR7 227 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 TOMM20LQ6UXN7 152 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 OR10D3Q8NH80 312 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 PLEKHF2Q9H8W4 249 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 LOXL2Q9Y4K0 774 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 V9GYS6 101 aa10.99□□□□□ -0.65
RETREG3-201ENST00000309428 TRAPPC2LH3BP13 241 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 IL2RAP01589 272 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 CBLN4Q9NTU7 201 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 IGF2RP11717 2491 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 C3orf85A0A1B0GTC6 90 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 A0A1W2PPV4 95 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 TGOLN2O43493 480 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 DTX1Q86Y01 620 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 GNPNAT1Q96EK6 184 aaPredicted RBP10.98□□□□□ -0.65
RETREG3-201ENST00000309428 SMIM8Q96KF7 97 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 UCK1Q9HA47 277 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 NOSIPQ9Y314 301 aaKnown RBP10.98□□□□□ -0.65
RETREG3-201ENST00000309428 DMRT1Q9Y5R6 373 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 IGKV1-9A0A0C4DH69 117 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 IGHV3-13P01766 116 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 IGHV3-7P01780 117 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
RETREG3-201ENST00000309428 CYB561P49447 251 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms