RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PLP2Q04941 152 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 MIDNQ504T8 468 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 PEG10Q86TG7 708 aaKnown RBP18.8■□□□□ 0.6
TPM4-201ENST00000300933 MDP1Q86V88 176 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 TMEM178AQ8NBL3 297 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 ZNF391Q9UJN7 358 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 ZNF732B4DXR9 585 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 PET100P0DJ07 73 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 RPL12P30050 165 aaKnown RBP18.8■□□□□ 0.6
TPM4-201ENST00000300933 SP6Q3SY56 376 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 NRN1LQ496H8 165 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 SLC22A25Q6T423 547 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 PIEZO2Q9H5I5 2752 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 LYZL6O75951 148 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 PTGER4P35408 488 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 FHITP49789 147 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 MALLQ13021 153 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 DEFB109BQ30KR1 87 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 ASCL4Q6XD76 172 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 P4HA3Q7Z4N8 544 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 CD300LFQ8TDQ1 290 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 K7EPK0 472 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 CST4P01036 141 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 RPS2P15880 293 aaKnown RBP18.79■□□□□ 0.6
TPM4-201ENST00000300933 FCGR2CP31995 323 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 OR2T2Q6IF00 324 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 FAM71E2Q8N5Q1 922 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 APOBEC3DQ96AK3 386 aaPredicted RBP18.79■□□□□ 0.6
TPM4-201ENST00000300933 ZDHHC11Q9H8X9 412 aa18.79■□□□□ 0.6
TPM4-201ENST00000300933 SYNGR1O43759 233 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 RBM11P57052 281 aaKnown RBP18.78■□□□□ 0.6
TPM4-201ENST00000300933 TMEM268Q5VZI3 342 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 FBXW9Q5XUX1 488 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 TRIB1Q96RU8 372 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 DNAJB11Q9UBS4 358 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 AP4M1O00189 453 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 SCGB1D2O95969 90 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 TMEM33P57088 247 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 IAH1Q2TAA2 248 aaPredicted RBP18.78■□□□□ 0.6
TPM4-201ENST00000300933 OR2B11Q5JQS5 317 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 OR1K1Q8NGR3 316 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 MTCH1Q9NZJ7 389 aa18.78■□□□□ 0.6
TPM4-201ENST00000300933 LSM5Q9Y4Y9 91 aaKnown RBP18.78■□□□□ 0.6
TPM4-201ENST00000300933 CEACAM18A8MTB9 384 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 YIF1AO95070 293 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 PFDN5Q99471 154 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 GGACTQ9BVM4 153 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 CD300LBA8K4G0 201 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 TAAR5O14804 337 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 LY86O95711 162 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 FBP1P09467 338 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 APLNRP35414 380 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 ARR3P36575 388 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 SULT1A1P50225 295 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 ERVS71-1P61550 626 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 GUK1Q16774 197 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 CNEP1R1Q8N9A8 125 aa18.77■□□□□ 0.6
TPM4-201ENST00000300933 RBMXP38159 391 aaKnown RBP18.77■□□□□ 0.59
TPM4-201ENST00000300933 PHLDA2Q53GA4 152 aa18.77■□□□□ 0.59
TPM4-201ENST00000300933 ZDHHC23Q8IYP9 409 aa18.77■□□□□ 0.59
TPM4-201ENST00000300933 C17orf78Q8N4C9 275 aa18.77■□□□□ 0.59
TPM4-201ENST00000300933 HSF4Q9ULV5 492 aa18.77■□□□□ 0.59
TPM4-201ENST00000300933 C14orf166Q9Y224 244 aaKnown RBP18.77■□□□□ 0.59
TPM4-201ENST00000300933 UMAD1C9J7I0 102 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 C1QL1O75973 258 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 CA6P23280 308 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 ARL6IP1Q15041 203 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 BCL2L2Q92843 193 aaPredicted RBP18.76■□□□□ 0.59
TPM4-201ENST00000300933 INTS1Q8N201 2190 aaKnown RBP18.76■□□□□ 0.59
TPM4-201ENST00000300933 GTF3C1Q12789 2109 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 SMG1Q96Q15 3661 aaKnown RBP18.76■□□□□ 0.59
TPM4-201ENST00000300933 PDCD6O75340 191 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 SNCAP37840 140 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 IL15RAQ13261 267 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 ZNF565Q8N9K5 539 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 FBXO7Q9Y3I1 522 aa18.76■□□□□ 0.59
TPM4-201ENST00000300933 PPIHO43447 177 aaKnown RBP18.75■□□□□ 0.59
TPM4-201ENST00000300933 GATCO43716 136 aaKnown RBP18.75■□□□□ 0.59
TPM4-201ENST00000300933 OR13C7P0DN81 318 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 NOVA1P51513 510 aaKnown RBP18.75■□□□□ 0.59
TPM4-201ENST00000300933 IDH3GP51553 393 aaPredicted RBP18.75■□□□□ 0.59
TPM4-201ENST00000300933 RAB2AP61019 212 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 CDPF1Q6NVV7 123 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 ERGIC1Q969X5 290 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 GPHA2Q96T91 129 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 CNTNAP3Q9BZ76 1288 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 JTBO76095 146 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 HMGN3Q15651 99 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 OR11L1Q8NGX0 322 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 BSCL2Q96G97 398 aaPredicted RBP18.75■□□□□ 0.59
TPM4-201ENST00000300933 SCGB3A2Q96PL1 93 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 TMPRSS5Q9H3S3 457 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 POMT1Q9Y6A1 747 aa18.75■□□□□ 0.59
TPM4-201ENST00000300933 FUT3P21217 361 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 CEACAM21Q3KPI0 293 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 MEMO1Q9Y316 297 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 ANKRD11Q6UB99 2663 aaPredicted RBP18.74■□□□□ 0.59
TPM4-201ENST00000300933 SELEP16581 610 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 PIGPP57054 158 aa18.74■□□□□ 0.59
TPM4-201ENST00000300933 TOLLIPQ9H0E2 274 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms