RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ZNF502Q8TBZ5 544 aa13.13□□□□□ -0.31
SCN3B-201ENST00000299333 NKX2-6A6NCS4 301 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF345Q14585 488 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 WDR31Q8NA23 367 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 OR1P1Q8NH06 330 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 TMSB15BA0A087X1C1 80 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 CAPZBP47756 277 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 CKS1BP61024 79 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 RPEQ96AT9 228 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 LDLRAD4O15165 306 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 NMBP08949 121 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 GFERP55789 205 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 TMEM108Q6UXF1 575 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 NT5CQ8TCD5 201 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 HES7Q9BYE0 225 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 PRRG2O14669 202 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 NUDT10Q8NFP7 164 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 ZBP1Q9H171 429 aa13.12□□□□□ -0.31
SCN3B-201ENST00000299333 C11orf68Q9H3H3 251 aaKnown RBP13.12□□□□□ -0.31
SCN3B-201ENST00000299333 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 SARAFQ96BY9 339 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 K7ESF4 209 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 SPINK2P20155 84 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 VDAC1P21796 283 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 DSCR4P56555 118 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-201ENST00000299333 DEGS2Q6QHC5 323 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 TUSC5Q8IXB3 177 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 MMP16P51512 607 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 CLDN18P56856 261 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-201ENST00000299333 ALG14Q96F25 216 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 CCL2P13500 99 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 KIAA0040Q15053 153 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 SLC25A34Q6PIV7 304 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 DHRS7CA6NNS2 312 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 M0R296 226 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 CXorf1O96002 111 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF32P17041 273 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
SCN3B-201ENST00000299333 RELBQ01201 579 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 FAM53BQ14153 422 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 MEGF9Q9H1U4 602 aa13.11□□□□□ -0.31
SCN3B-201ENST00000299333 CTLA4P16410 223 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 OTX1P32242 354 aaPredicted RBP13.1□□□□□ -0.31
SCN3B-201ENST00000299333 TNXAQ16473 311 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 PARM1Q6UWI2 310 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 CCL28Q9NRJ3 127 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 IGLV3-25P01717 112 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 CD74P04233 296 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
SCN3B-201ENST00000299333 ACP1P24666 158 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 MFAP2P55001 183 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF793Q6ZN11 406 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF788Q6ZQV5 615 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 SIT1Q9Y3P8 196 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 OGG1O15527 345 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 MT-CO3P00414 261 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 MVB12AQ96EY5 273 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 MFRPQ9BY79 579 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 DNASE2O00115 360 aaPredicted RBP13.1□□□□□ -0.31
SCN3B-201ENST00000299333 WNT5AP41221 380 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 C1orf185Q5T7R7 199 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 AMER3Q8N944 861 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 SIGMAR1Q99720 223 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 VSIG4Q9Y279 399 aa13.1□□□□□ -0.31
SCN3B-201ENST00000299333 RECKO95980 971 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 NKX2-2O95096 273 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 BCL2P10415 239 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 KLK2P20151 261 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 SLC36A1Q7Z2H8 476 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 HMGCLL1Q8TB92 370 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 HIST1H4GQ99525 98 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 SRP14P37108 136 aaKnown RBP13.09□□□□□ -0.31
SCN3B-201ENST00000299333 WIPI1Q5MNZ9 446 aaPredicted RBP13.09□□□□□ -0.31
SCN3B-201ENST00000299333 DCAF12L2Q5VW00 463 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 TEX29Q8N6K0 151 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
SCN3B-201ENST00000299333 MRGPRFQ96AM1 343 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 ADTRPQ96IZ2 230 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
SCN3B-201ENST00000299333 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms