RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 PCDHB10Q9UN67 800 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 PEX16Q9Y5Y5 336 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 ETV7Q9Y603 341 aa5.36□□□□□ -1.55
DEPDC4-201ENST00000299185 ARHGAP32A7KAX9 2087 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A0G2JMP0 313 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A0X1KG70 313 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A1W2PRD5 423 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A1W2PRF3 423 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A1W2PRM7 423 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MEIOCA2RUB1 952 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MMP23AO75900 390 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV3-7P01780 117 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 WNT2P09544 360 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MUC1P15941 1255 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SLC25A16P16260 332 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 HIST1H1DP16402 221 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 USF1P22415 310 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 CPT2P23786 658 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SSTR5P35346 364 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SOX6P35712 828 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM33P57088 247 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 DGCR2P98153 550 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 GNMTQ14749 295 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF146Q15072 292 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM155Q4W5P6 130 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 NHLRC3Q5JS37 347 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SPIN3Q5JUX0 258 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 RSBN1Q5VWQ0 802 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 FIP1L1Q6UN15 594 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF782Q6ZMW2 699 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 Q6ZTK2 550 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 IL17RELQ6ZVW7 336 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 Q71RC1 249 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 PDZD9Q8IXQ8 264 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MUC20Q8N307 709 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 PNKDQ8N490 385 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 OR4M2Q8NGB6 313 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 OR6Q1Q8NGQ2 317 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 OR10R2Q8NGX6 335 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 OR1L1Q8NH94 360 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SETD6Q8TBK2 473 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MRPL30Q8TCC3 161 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MRGPRDQ8TDS7 321 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 CREB3L1Q96BA8 519 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 RBMXL1Q96E39 390 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 PARP12Q9H0J9 701 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 ETAA1Q9NY74 926 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 RASL12Q9NYN1 266 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 ABRACLQ9P1F3 81 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNRD1Q9P1U0 126 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 FBLN5Q9UBX5 448 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 FBXO9Q9UK97 447 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 RAB22AQ9UL26 194 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MRPS7Q9Y2R9 242 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 SOX21Q9Y651 276 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 V9GYH0 126 aa5.35□□□□□ -1.55
DEPDC4-201ENST00000299185 MEIKINA0A087WXM9 373 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV3-43A0A0B4J1X8 118 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 A0A1W2PQ09 198 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 ODAMA1E959 279 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 J3QRK9 145 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 K7N7A8 449 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 IFNL4K9M1U5 179 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 NDUFS8O00217 210 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SH2D1BO14796 132 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 NDUFB3O43676 98 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 ZNF780AO75290 641 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 TK1P04183 234 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 CD3GP09693 182 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 IGHV3-43DP0DP04 118 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 OMGP23515 440 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 COX7A1P24310 79 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 TNFSF8P32971 234 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 PSMD7P51665 324 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 P2RX3P56373 397 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 GNB2P62879 340 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 MPV17LQ2QL34 196 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM249Q2WGJ8 235 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 CDNFQ49AH0 187 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 ESCO2Q56NI9 601 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 KRBOX4Q5JUW0 171 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 TMEM69Q5SWH9 247 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SHEQ5VZ18 495 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 BTN2A1Q7KYR7 527 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SLC36A1Q7Z2H8 476 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 OR8H2Q8N162 312 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 FAM89BQ8N5H3 189 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 GVQW1Q8N7I0 195 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 OR56B1Q8NGI3 324 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 RFESDQ8TAC1 157 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 AP3S1Q92572 193 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 LEAP2Q969E1 77 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 MSI2Q96DH6 328 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 RAB3CQ96E17 227 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SNX22Q96L94 193 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 NEDD4LQ96PU5 975 aa5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 URM1Q9BTM9 101 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SSBP3Q9BWW4 388 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 CHMP1AQ9HD42 196 aaPredicted RBP5.34□□□□□ -1.55
DEPDC4-201ENST00000299185 SIRT7Q9NRC8 400 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms