RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TNFSF18Q9UNG2 199 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 PIGPP57054 158 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 NKX6-1P78426 367 aaPredicted RBP18.06■□□□□ 0.48
SOX17-201ENST00000297316 SNTB1Q13884 538 aaKnown RBP18.06■□□□□ 0.48
SOX17-201ENST00000297316 IL13RA2Q14627 380 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 HERPUD1Q15011 391 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 Q6P435 159 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 C11orf53Q8IXP5 236 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 MOB3AQ96BX8 217 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 ELOVL5Q9NYP7 299 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 MBD2Q9UBB5 411 aa18.06■□□□□ 0.48
SOX17-201ENST00000297316 DIDO1Q9BTC0 2240 aaKnown RBP18.06■□□□□ 0.48
SOX17-201ENST00000297316 RNF222A6NCQ9 220 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 IFNA2P01563 188 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 THBDP07204 575 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 HOXB5P09067 269 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 ZP3P21754 424 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 CD40P25942 277 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 ERVK11-1P61568 191 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 PHLDA2Q53GA4 152 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 PXDC1Q5TGL8 231 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 Q6ZS49 121 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 MRPL30Q8TCC3 161 aaKnown RBP18.05■□□□□ 0.48
SOX17-201ENST00000297316 UFSP2Q9NUQ7 469 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 LINC00596Q86U02 117 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 OR11L1Q8NGX0 322 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 MED9Q9NWA0 146 aa18.05■□□□□ 0.48
SOX17-201ENST00000297316 IGKV1-6A0A0C4DH72 117 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 TEX13DA0A0J9YY54 714 aaPredicted RBP18.04■□□□□ 0.48
SOX17-201ENST00000297316 TUBG1P23258 451 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 SP6Q3SY56 376 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 BEX5Q5H9J7 111 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 TMEM171Q8WVE6 324 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 NRIP2Q9BQI9 281 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 NMES1Q9C002 83 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 TUBG2Q9NRH3 451 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 H0YIZ8 118 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 WNT9BO14905 357 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 PGA5P0DJD9 388 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 C3orf36Q3SXR2 165 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 SGPP2Q8IWX5 399 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 OR5T2Q8NGG2 359 aa18.04■□□□□ 0.48
SOX17-201ENST00000297316 PPYP01298 95 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 ZNF44P15621 663 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 PSMB6P28072 239 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 GLRXP35754 106 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 CA7P43166 264 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 GLP1RP43220 463 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 SPRNQ5BIV9 151 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 OR2Z1Q8NG97 314 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 RNF126Q9BV68 326 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 CXXC4Q9H2H0 198 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 METTL8Q9H825 291 aaKnown RBP18.03■□□□□ 0.48
SOX17-201ENST00000297316 SLC2A9Q9NRM0 540 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 SESN1Q9Y6P5 492 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 A6NLC8 198 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 BET1O15155 118 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 TAGLNQ01995 201 aaKnown RBP18.03■□□□□ 0.48
SOX17-201ENST00000297316 RBM39Q14498 530 aaKnown RBP18.03■□□□□ 0.48
SOX17-201ENST00000297316 ST6GALNAC3Q8NDV1 305 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 RTN4IP1Q8WWV3 396 aaPredicted RBP18.03■□□□□ 0.48
SOX17-201ENST00000297316 SPACA1Q9HBV2 294 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 PFDN2Q9UHV9 154 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 POLDIP2Q9Y2S7 368 aa18.03■□□□□ 0.48
SOX17-201ENST00000297316 CACNA1DQ01668 2161 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.02■□□□□ 0.48
SOX17-201ENST00000297316 TMEM210A6NLX4 147 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 SIRPB1O00241 398 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 DEGS1O15121 323 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 RCC1P18754 421 aaPredicted RBP18.02■□□□□ 0.48
SOX17-201ENST00000297316 NUP62P37198 522 aaPredicted RBP18.02■□□□□ 0.48
SOX17-201ENST00000297316 CEBPDP49716 269 aaPredicted RBP18.02■□□□□ 0.48
SOX17-201ENST00000297316 SRSF7Q16629 238 aaKnown RBP eCLIP18.02■□□□□ 0.48
SOX17-201ENST00000297316 TUSC1Q2TAM9 212 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 POC1AQ8NBT0 407 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 VRK1Q99986 396 aaPredicted RBP18.02■□□□□ 0.48
SOX17-201ENST00000297316 NAA60Q9H7X0 242 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 IFT22Q9H7X7 185 aa18.02■□□□□ 0.48
SOX17-201ENST00000297316 TRAV39A0A0B4J263 110 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 DPRXA6NFQ7 191 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 TEX46H3BTG2 121 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 NXPH2O95156 264 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 SLC34A2O95436 690 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 OR2H2O95918 312 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 TFF1P04155 84 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 OR5AC1P0C628 307 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 KCNRGQ8N5I3 272 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 CCL21O00585 134 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 HERV-K104P61576 105 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 ABCA11PQ4W5N1 156 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 THAP6Q8TBB0 222 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 MRPL24Q96A35 216 aaKnown RBP18.01■□□□□ 0.47
SOX17-201ENST00000297316 PIK3IP1Q96FE7 263 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 WFIKKN1Q96NZ8 548 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 ARPC5LQ9BPX5 153 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 MRPL37Q9BZE1 423 aaKnown RBP18.01■□□□□ 0.47
SOX17-201ENST00000297316 C1orf123Q9NWV4 160 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 ATP23Q9Y6H3 246 aa18.01■□□□□ 0.47
SOX17-201ENST00000297316 KIAA2026Q5HYC2 2103 aa18■□□□□ 0.47
SOX17-201ENST00000297316 TRDCB7Z8K6 153 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms