RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 C15orf40Q8WUR7 153 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 PDCD1LG2Q9BQ51 273 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 NUDT16L1Q9BRJ7 211 aaKnown RBP10.04□□□□□ -0.8
HMGB2-201ENST00000296503 CHST5Q9GZS9 411 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 C20orf85Q9H1P6 137 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 KAAG1Q9UBP8 84 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 IGHV2-70DA0A0C4DH43 119 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 KIR2DS1A0A191URI9 304 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 SMIM30A4D0T7 59 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 J3QT63 122 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 NDUFB3O43676 98 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 ZFPL1O95159 310 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 S100A11P31949 105 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 MNDAP41218 407 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 ATP1B3P54709 279 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 KRTAP21-3Q3LHN1 58 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 OLFML2AQ68BL7 652 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 RPL22L1Q6P5R6 122 aaKnown RBP10.04□□□□□ -0.8
HMGB2-201ENST00000296503 GLDNQ6ZMI3 551 aaPredicted RBP10.04□□□□□ -0.8
HMGB2-201ENST00000296503 ZNF488Q96MN9 340 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 GPN1Q9HCN4 374 aaPredicted RBP10.04□□□□□ -0.8
HMGB2-201ENST00000296503 RASL12Q9NYN1 266 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 SPATA2Q9UM82 520 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
HMGB2-201ENST00000296503 ZNF98A6NK75 572 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
HMGB2-201ENST00000296503 PDCD5O14737 125 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 PLATP00750 562 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 ATF1P18846 271 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 CXCL2P19875 107 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 RBP2P50120 134 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 PAX2Q02962 417 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 PAX8Q06710 450 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 ATPAF1Q5TC12 328 aaPredicted RBP10.03□□□□□ -0.8
HMGB2-201ENST00000296503 STUMQ69YW2 141 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 CALHM1Q8IU99 346 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 PDZD9Q8IXQ8 264 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 BATF2Q8N1L9 274 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 FAM216BQ8N7L0 139 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 POC1AQ8NBT0 407 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 TSEN15Q8WW01 171 aaKnown RBP10.03□□□□□ -0.8
HMGB2-201ENST00000296503 OPN4Q9UHM6 478 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 DHDHQ9UQ10 334 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 SVEP1Q4LDE5 3571 aa10.03□□□□□ -0.8
HMGB2-201ENST00000296503 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 ENSAO43768 121 aaKnown RBP10.02□□□□□ -0.8
HMGB2-201ENST00000296503 NXPH2O95156 264 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 TFF1P04155 84 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 PGA5P0DJD9 388 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 MTCP1P56278 107 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 LRRC10Q5BKY1 277 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 DUX4L9Q6RFH8 374 aaPredicted RBP10.02□□□□□ -0.8
HMGB2-201ENST00000296503 C1QL2Q7Z5L3 287 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 ZFP41Q8N8Y5 198 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 DTX3Q8N9I9 347 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 PKIBQ9C010 78 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 MGAT4CQ9UBM8 478 aa10.02□□□□□ -0.8
HMGB2-201ENST00000296503 IGKV1-27A0A075B6S5 117 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 C22orf46C9J442 243 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 LPLP06858 475 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 LIPFP07098 398 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 PSG2P11465 335 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 AMY2BP19961 511 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 RAB3BP20337 219 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 IL13RA1P78552 427 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 IL24Q13007 206 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 SMIM21Q3B7S5 101 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 ZNF626Q68DY1 528 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 ACP7Q6ZNF0 438 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 ZNF788Q6ZQV5 615 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 PNLDC1Q8NA58 520 aaKnown RBP10.02□□□□□ -0.81
HMGB2-201ENST00000296503 DNAAF1Q8NEP3 725 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 OR13C9Q8NGT0 318 aa10.02□□□□□ -0.81
HMGB2-201ENST00000296503 IGKV1-9A0A0C4DH69 117 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 RFPL4AA6NLU0 287 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 RFPL4AL1F8VTS6 287 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 GABARAPH6UMI1 98 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 OGG1O15527 345 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 CYB5AP00167 134 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 ACAA1P09110 424 aaPredicted RBP10.01□□□□□ -0.81
HMGB2-201ENST00000296503 NDUFB7P17568 137 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 EPHA1P21709 976 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 MPZP25189 248 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 SOX2P48431 317 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 POU3F4P49335 361 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 FGL1Q08830 312 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 MADCAM1Q13477 382 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 CDK5R1Q15078 307 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 UQCC3Q6UW78 93 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 LHFPL2Q6ZUX7 228 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 SLC25A26Q70HW3 274 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 CDH26Q8IXH8 852 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 MKXQ8IYA7 352 aa10.01□□□□□ -0.81
HMGB2-201ENST00000296503 FGFRL1Q8N441 504 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms