RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF71Q9NQZ8 489 aaPredicted RBP14.22□□□□□ -0.13
SSRP1-202ENST00000293880 SLC17A5Q9NRA2 495 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 ISLRO14498 428 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 FABP2P12104 132 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 GABRG2P18507 467 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 LEMD1Q68G75 181 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 RHBDD2Q6NTF9 364 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 CBLN3Q6UW01 205 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 CD82P27701 267 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 OR2A5Q96R48 311 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 SEBOXQ9HB31 216 aaPredicted RBP14.22□□□□□ -0.13
SSRP1-202ENST00000293880 CCL28Q9NRJ3 127 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 CORTO00230 105 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 LANCL1O43813 399 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 PRR35P0CG20 571 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
SSRP1-202ENST00000293880 IZUMO4Q1ZYL8 232 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 OR10G8Q8NGN5 311 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 ANAPC16Q96DE5 110 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 DMRTA2Q96SC8 542 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 OOEPA6NGQ2 149 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 FAM157CP0CG43 387 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 PMELP40967 661 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
SSRP1-202ENST00000293880 LGALSLQ3ZCW2 172 aaPredicted RBP14.22□□□□□ -0.13
SSRP1-202ENST00000293880 SLC36A1Q7Z2H8 476 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 TBX21Q9UL17 535 aa14.22□□□□□ -0.13
SSRP1-202ENST00000293880 H3BQ15 152 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 HERVK_113P61574 105 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 Q8IYB0 196 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 ATOH7Q8N100 152 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 HAND1O96004 215 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 TNFRSF1AP19438 455 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 ID4P47928 161 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 RTP5Q14D33 572 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 CXXC4Q9H2H0 198 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 P2RY1P47900 373 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 ZNF426Q9BUY5 554 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 NEU3Q9UQ49 428 aa14.21□□□□□ -0.13
SSRP1-202ENST00000293880 NKX2-6A6NCS4 301 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 TRDCB7Z8K6 153 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 PSG2P11465 335 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 HLA-GP17693 338 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 MS4A3Q96HJ5 214 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 HSPB9Q9BQS6 159 aa14.21□□□□□ -0.14
SSRP1-202ENST00000293880 BMI1P35226 326 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 RPL30P62888 115 aaKnown RBP14.2□□□□□ -0.14
SSRP1-202ENST00000293880 LYZL2Q7Z4W2 148 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
SSRP1-202ENST00000293880 CLN8Q9UBY8 286 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 REG1BP48304 166 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 TWIST1Q15672 202 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 MIXL1Q9H2W2 232 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 SPTY2D1-AS1A0A0U1RR47 76 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 A0A1W2PN81 502 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 EWSR1Q01844 656 aaKnown RBP eCLIP14.2□□□□□ -0.14
SSRP1-202ENST00000293880 TMEM255AQ5JRV8 349 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 C1QL3Q5VWW1 255 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 OR2T8A6NH00 312 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 DHRS7CA6NNS2 312 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 KLF3P57682 345 aaPredicted RBP14.2□□□□□ -0.14
SSRP1-202ENST00000293880 PDCD6O75340 191 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 MOGAT3Q86VF5 341 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 MRGPRFQ96AM1 343 aa14.2□□□□□ -0.14
SSRP1-202ENST00000293880 HRKO00198 91 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 SPEM2Q0P670 501 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 C10orf113Q5VZT2 155 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 PIPOXQ9P0Z9 390 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 VSIG4Q9Y279 399 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 FGF9P31371 208 aaPredicted RBP14.19□□□□□ -0.14
SSRP1-202ENST00000293880 SRP14P37108 136 aaKnown RBP14.19□□□□□ -0.14
SSRP1-202ENST00000293880 UBE2V2Q15819 145 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 MVB12AQ96EY5 273 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 FOXJ2Q9P0K8 574 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 EFNB2P52799 333 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 BHLHA15Q7RTS1 189 aaPredicted RBP14.19□□□□□ -0.14
SSRP1-202ENST00000293880 DOLPP1Q86YN1 238 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 FOXO1Q12778 655 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 OR4X1Q8NH49 305 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 MARVELD1Q9BSK0 173 aa14.19□□□□□ -0.14
SSRP1-202ENST00000293880 SRFP11831 508 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 MAJINQ3KP22 176 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 LDLRAD3Q86YD5 345 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 ADAMTS17Q8TE56 1095 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 RPP25Q9BUL9 199 aaKnown RBP14.18□□□□□ -0.14
SSRP1-202ENST00000293880 RELQ04864 619 aaPredicted RBP14.18□□□□□ -0.14
SSRP1-202ENST00000293880 CALHM1Q8IU99 346 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 CGB1A6NKQ9 187 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 NKX2-2O95096 273 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 OR4A8P0C604 315 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 COL8A1P27658 744 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 DEFB124Q8NES8 71 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 CLDN18P56856 261 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 C21orf58P58505 322 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 RNPS1Q15287 305 aaKnown RBP14.18□□□□□ -0.14
SSRP1-202ENST00000293880 LPAR2Q9HBW0 351 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 NHSQ6T4R5 1651 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms