RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FAM74A3Q4VXF1 159 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 Q6ZN92 141 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 GVQW1Q8N7I0 195 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 BCL2L2Q92843 193 aaPredicted RBP10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 C8orf44Q96CB5 159 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 P4HTMQ9NXG6 502 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 CCL27Q9Y4X3 112 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 NHLH2Q02577 135 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 RPEL1Q2QD12 228 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 DMRTC1Q5HYR2 192 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 FLVCR1-AS1Q8TAF5 88 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 SNX22Q96L94 193 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 C1QTNF6Q9BXI9 259 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 FKBP11Q9NYL4 201 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ALG1L2C9J202 215 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 LINC01387J3KSC0 135 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 GYPAP02724 150 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 VDAC1P21796 283 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ALKBH3Q96Q83 286 aaPredicted RBP10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 GHITMQ9H3K2 345 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 SLC25A22Q9H936 323 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ANXA10Q9UJ72 324 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 DAOP14920 347 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 DSCR4P56555 118 aaPredicted RBP10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 LYRM7Q5U5X0 104 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 DYRK2Q92630 601 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 RAB24Q969Q5 203 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 M0R1X1 148 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 CIDEAO60543 219 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 NMBP08949 121 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 MDH2P40926 338 aaKnown RBP10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 LPAR6P43657 344 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 SULT1A2P50226 295 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 POLR2GP62487 172 aaKnown RBP eCLIP10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ELOBQ15370 118 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 PRICKLE4Q2TBC4 344 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 STUMQ69YW2 141 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM91Q6ZNR0 172 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 C20orf196Q8IYI0 205 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 AMER3Q8N944 861 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF383Q8NA42 475 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ACY3Q96HD9 319 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10C1Q96KK4 312 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 ATP5SQ99766 215 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 TNFSF18Q9UNG2 199 aa10.41□□□□□ -0.74
SYNGAP1-201ENST00000293748 SCN8AQ9UQD0 1980 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDH23Q9H251 3354 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 RER1O15258 196 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDS2O95674 445 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 CTLA4P16410 223 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10J1P30954 320 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 ETV3LQ6ZN32 361 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10V1Q8NGI7 309 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM56Q96MV1 263 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 ANGPTL4Q9BY76 406 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TAAR3PQ9P1P4 343 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 IGHV3-15A0A0B4J1V0 119 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR3A4PP47883 348 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 ERVS71-1P61550 626 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 RPL11P62913 178 aaKnown RBP10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 DLK1P80370 383 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 DUSP2Q05923 314 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 LRP11Q86VZ4 500 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 SARAFQ96BY9 339 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TIMD4Q96H15 378 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 BMPR1BO00238 502 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF253O75346 499 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TIAF1O95411 115 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 NGFP01138 241 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAM157BP0CG42 384 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 GNB1P62873 340 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
SYNGAP1-201ENST00000293748 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5H15A6NDH6 313 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5H1A6NKK0 313 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 TNFSF11O14788 317 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 NAT2P11245 290 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 YBX1P67809 324 aaKnown RBP10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 UBE2V2Q15819 145 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 TRAT1Q6PIZ9 186 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 TM4SF19Q96DZ7 209 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 ADAT1Q9BUB4 502 aaKnown RBP10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC26A1Q9H2B4 701 aa10.4□□□□□ -0.75
SYNGAP1-201ENST00000293748 H3BQ15 152 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 SYNGR2O43760 224 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5AL1P0C617 328 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 NSUN5P2Q63ZY6 315 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 ABLIM2Q6H8Q1 611 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms