RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 COL13A1Q5TAT6 717 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-201ENST00000275233 PLXNB2O15031 1838 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 TGOLN2O43493 480 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 PMS2P11Q13670 270 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 ATP1A1-AS1Q5TC04 95 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 FBXW9Q5XUX1 488 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 CCL13Q99616 98 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 HEXA-AS1Q9H8Q6 139 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
SHPRH-201ENST00000275233 ZFP36L2P47974 494 aaKnown RBP10.4□□□□□ -0.75
SHPRH-201ENST00000275233 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.75
SHPRH-201ENST00000275233 CLEC18BQ6UXF7 455 aa10.4□□□□□ -0.75
SHPRH-201ENST00000275233 OR8I2Q8N0Y5 310 aa10.4□□□□□ -0.75
SHPRH-201ENST00000275233 IGHV3OR16-12A0A075B7B8 117 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 UPK3AO75631 287 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PSG2P11465 335 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PPP1CCP36873 323 aaKnown RBP10.39□□□□□ -0.75
SHPRH-201ENST00000275233 SPCS3P61009 180 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 TGIF1Q15583 401 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 TMEM116Q8NCL8 245 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 GMPPAQ96IJ6 420 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-201ENST00000275233 SOSTQ9BQB4 213 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 BGLAPP02818 100 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 INHBBP09529 407 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 OR10D4PQ8NGN7 298 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 DTD1Q8TEA8 209 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PARP11Q9NR21 331 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 CGB1A6NKQ9 187 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 MOSPD3O75425 235 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PRSS1P07477 247 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 NPY1RP25929 384 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 SLC6A1P30531 599 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 MPV17LQ2QL34 196 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 LRP11Q86VZ4 500 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 Q8WTZ3 238 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 MS4A5Q9H3V2 200 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 FOCADQ5VW36 1801 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 OR1L1Q8NH94 360 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 ZPLD1Q8TCW7 415 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 FGF11Q92914 225 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 ADTRPQ96IZ2 230 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 AURKAIP1Q9NWT8 199 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-201ENST00000275233 TCRBV16S1A1N1A0A5B0 115 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PRSS44E7EML9 344 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 FOXS1O43638 330 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 IGKV1D-16P01601 117 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 C1QCP02747 245 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 GPR6P46095 362 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-201ENST00000275233 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 KLHDC1Q8N7A1 406 aa10.39□□□□□ -0.75
SHPRH-201ENST00000275233 SYNGR2O43760 224 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 CLDN14O95500 239 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 LOXL3P58215 753 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 INPP5JQ15735 1006 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 IGKV3D-15A0A087WSY6 115 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 IGKV3-15P01624 115 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 FAM87AP0C7U9 286 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 NAT2P11245 290 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 ATP5SQ99766 215 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 DMKNQ6E0U4 476 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 ADAT3Q96EY9 351 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PRO1933Q9H354 126 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PPIAL4AQ9Y536 164 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 NINQ8N4C6 2090 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 TRAV8-7A0A075B6U6 113 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PPYP01298 95 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 CD82P27701 267 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 C21orf58P58505 322 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 HLA-DRB3P79483 266 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PRSS54Q6PEW0 395 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 CD300LDQ6UXZ3 194 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 MRPL24Q96A35 216 aaKnown RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 RNF122Q9H9V4 155 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PRSS50Q9UI38 385 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 PTPRZ1P23471 2315 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 CEBPDP49716 269 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 RPL31P62899 125 aaKnown RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 GUCA2BQ16661 112 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 C10orf111Q8N326 155 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 SLC35B3Q9H1N7 401 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 TECRQ9NZ01 308 aaKnown RBP10.38□□□□□ -0.75
SHPRH-201ENST00000275233 M0R2Z0 102 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 TMEM127O75204 238 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 HMGA2P52926 109 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 C16orf82Q7Z2V1 217 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
SHPRH-201ENST00000275233 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms