RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ATG4DQ86TL0 474 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 DCAF4L2Q8NA75 395 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 C5orf17Q8NAS9 161 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 PLPPR1Q8TBJ4 325 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CLEC1BQ9P126 229 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CLEC4EQ9ULY5 219 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 H7C1C5 153 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 SOCS1O15524 211 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 TRAF3IP2O43734 574 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 GDF1P27539 372 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 OTX1P32242 354 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 EMP2P54851 167 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CLDN17P56750 224 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 MLF1P58340 268 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 LCN6P62502 163 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 GNMTQ14749 295 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 LILRA6Q6PI73 481 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 PARS2Q7L3T8 475 aaKnown RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 VASH2Q86V25 355 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 AMZ2Q86W34 360 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 SULF2Q8IWU5 870 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF440Q8IYI8 595 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 OR2M3Q8NG83 312 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 OR1B1Q8NGR6 318 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 AICDAQ9GZX7 198 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 PLAGL1Q9UM63 463 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 MYO7AQ13402 2215 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 ARID1BQ8NFD5 2236 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 STATHP02808 62 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CRISP2P16562 243 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 BCL6P41182 706 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 METAP1P53582 386 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 TMEM50BP56557 158 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CD226Q15762 336 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 MPV17L2Q567V2 206 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 KIAA0895LQ68EN5 471 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CPEB2Q7Z5Q1 589 aaKnown RBP7.98□□□□□ -1.13
PDGFC-201ENST00000274071 ATOH7Q8N100 152 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CCDC3Q9BQI4 270 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 TM2D1Q9BX74 207 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 CES1P1Q9UKY3 287 aa7.98□□□□□ -1.13
PDGFC-201ENST00000274071 KIF26BQ2KJY2 2108 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 MYOFQ9NZM1 2061 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 C5orf42Q9H799 3197 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TRAV8-6A0A0B4J262 113 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 DUXBA0A1W2PPF3 345 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 DPRXA6NFQ7 191 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TNFSF12O43508 249 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ADH1BP00325 375 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 GLI4P10075 376 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CCR2P41597 374 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 SLC6A8P48029 635 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF83P51522 516 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 SNU13P55769 128 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CSNK2A1P68400 391 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TLE1Q04724 770 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TRMT12Q53H54 448 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 BAGE2Q86Y30 109 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CSNK2A3Q8NEV1 391 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 SFRP2Q96HF1 295 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 LRFN3Q9BTN0 628 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 GTSF1LQ9H1H1 148 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 RPRMQ9NS64 109 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TMEM14AQ9Y6G1 99 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 VSTM5A8MXK1 200 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 K7EQS6 105 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 HS3ST1O14792 307 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CCL16O15467 120 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF253O75346 499 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CST7O76096 145 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 LINC00271P0C7V0 271 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 HIST1H1DP16402 221 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF16P17020 682 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 KITLGP21583 273 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 DUSP1P28562 367 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 CD70P32970 193 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 YPEL3P61236 119 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 MRPS34P82930 218 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 C1orf140Q5VVS0 124 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 COMMD2Q86X83 199 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 DEFB125Q8N687 156 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 POM121L2Q96KW2 1035 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZNF681Q96N22 645 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 NUDT16L1Q9BRJ7 211 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 ZDHHC11Q9H8X9 412 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 NRN1Q9NPD7 142 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 IL23AQ9NPF7 189 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TAC3Q9UHF0 121 aa7.97□□□□□ -1.13
PDGFC-201ENST00000274071 TBL2Q9Y4P3 447 aaKnown RBP7.97□□□□□ -1.13
PDGFC-201ENST00000274071 PRRC2BQ5JSZ5 2229 aaKnown RBP7.96□□□□□ -1.13
PDGFC-201ENST00000274071 BNIP3LO60238 219 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 CYC1P08574 325 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms