RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 HELTA6NFD8 242 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 EDIL3O43854 480 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 RPS27P42677 84 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SELENOPP49908 381 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF793Q6ZN11 406 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SLC16A13Q7RTY0 426 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TRMT61AQ96FX7 289 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TRAF4Q9BUZ4 470 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 P4HTMQ9NXG6 502 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 C1RLQ9NZP8 487 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 GREB1Q4ZG55 1949 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TRAV39A0A0B4J263 110 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM210A6NLX4 147 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 H7C2G1 150 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SYNGR2O43760 224 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TNFAIP6P98066 277 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SSPNQ14714 243 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SLC35E3Q7Z769 313 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 FAM24BQ8N5W8 94 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 IL22RA2Q969J5 263 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF552Q9H707 407 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 K7ERU9 68 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 BRS3P32247 399 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 TIAL1Q01085 375 aaKnown RBP eCLIP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 FMODQ06828 376 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PRICKLE4Q2TBC4 344 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 C6orf201Q7Z4U5 140 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 OR2D3Q8NGH3 330 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 SNRNP40Q96DI7 357 aaKnown RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GABRG3Q99928 467 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 RAB29O14966 203 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 COL5A1-AS1Q5SY13 56 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 C10orf113Q5VZT2 155 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 WSB2Q9NYS7 404 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PMELP40967 661 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ID1P41134 155 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CLDN18P56856 261 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PATE1Q8WXA2 126 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 STARD4Q96DR4 205 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 LPAR5Q9H1C0 372 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 SLC6A13Q9NSD5 602 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PRSS23O95084 383 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ID4P47928 161 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 KLF9Q13886 244 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM108Q6UXF1 575 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF831Q5JPB2 1677 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PRSS1P07477 247 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 BHLHA15Q7RTS1 189 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 C5orf17Q8NAS9 161 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 SLC25A40Q8TBP6 338 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ZFP64Q9NPA5 681 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 SBF2Q86WG5 1849 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 HPXP02790 462 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CD1AP06126 327 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 PAFAH1B2P68402 229 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 FBXO17Q96EF6 278 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GMPPAQ96IJ6 420 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CRYBA1P05813 215 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CD82P27701 267 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GBGT1Q8N5D6 347 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM208Q9BTX3 173 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 MFSD2BA6NFX1 497 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CYR61O00622 381 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 MT-ND6P03923 174 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CTLA4P16410 223 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GNG10P50151 68 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 B2MP61769 119 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF260Q3ZCT1 412 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 SPNS3Q6ZMD2 512 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 D2HGDHQ8N465 521 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 RASL11BQ9BPW5 248 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 MRM2Q9UI43 246 aaKnown RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 LIPGQ9Y5X9 500 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 TTRP02766 147 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GAPDHP04406 335 aaKnown RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 GABRA6Q16445 453 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 MPV17LQ2QL34 196 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 DGAT2L7PQ6IED9 249 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 BTLAQ7Z6A9 289 aa7.05□□□□□ -1.28
LIMD1-201ENST00000273317 TP53I13Q8NBR0 393 aaPredicted RBP7.05□□□□□ -1.28
LIMD1-201ENST00000273317 CXorf65A6NEN9 183 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ALKBH6Q3KRA9 238 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 CLEC18BQ6UXF7 455 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM251Q8N6I4 163 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 COA4Q9NYJ1 87 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 CDKN2AP42771 156 aaKnown RBP7.04□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF83P51522 516 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 IZUMO4Q1ZYL8 232 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 OR11G2Q8NGC1 345 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 CCL4L1Q8NHW4 92 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 V9GYH0 126 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 NCKAP5O14513 1909 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 TRGV8A0A0C4DH27 118 aa7.04□□□□□ -1.28
LIMD1-201ENST00000273317 DEFB108AA8MXU0 73 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms