RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 M0QZK8 103 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 M0R135 149 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TP53I11O14683 189 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 CD55P08174 381 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 OR4A8P0C604 315 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TUBG1P23258 451 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 PAX5Q02548 391 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 IL24Q13007 206 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF66Q6ZN08 573 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF799Q96GE5 643 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TPSD1Q9BZJ3 242 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 LAMP3Q9UQV4 416 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TLX3O43711 291 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 CLDN17P56750 224 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 ERVFC1-1P60608 527 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 SPIN3Q5JUX0 258 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TBC1D26Q86UD7 250 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 MAML2Q8IZL2 1156 aaPredicted RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
XRCC1-201ENST00000262887 FAM185AQ8N0U4 392 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM18Q96B42 140 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 P2RX4Q99571 388 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 SDK1Q7Z5N4 2213 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 SHANK1Q9Y566 2161 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 ETV2O00321 342 aaPredicted RBP12.92□□□□□ -0.34
XRCC1-201ENST00000262887 OR2J2O76002 312 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 PDLIM4P50479 330 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 IQCJQ1A5X6 159 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 C16orf82Q7Z2V1 217 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 KLHDC7BQ96G42 594 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 CCDC85CA6NKD9 419 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 CHST1O43916 411 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 IFNA5P01569 189 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
XRCC1-201ENST00000262887 PMS2P11Q13670 270 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 SNAI3Q3KNW1 292 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 TGIF2LYQ8IUE0 185 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 NEK7Q8TDX7 302 aa12.92□□□□□ -0.34
XRCC1-201ENST00000262887 NCOA6Q14686 2063 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 IGKV1-27A0A075B6S5 117 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 PPP5D1E7EU14 171 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 CA3P07451 260 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 ID3Q02535 119 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 PDCD1Q15116 288 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 ADIRFQ15847 76 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 RSPO1Q2MKA7 263 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 MRPL41Q8IXM3 137 aaKnown RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 OR2AE1Q8NHA4 323 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 OR2V1Q8NHB1 315 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 SIGLEC12Q96PQ1 595 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 CHRNA10Q9GZZ6 450 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 RPRMQ9NS64 109 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 GNRHRP30968 328 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 OR3A1P47881 315 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 ERVS71-1P61550 626 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 ENDOGQ14249 297 aaKnown RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
XRCC1-201ENST00000262887 NCR3LG1Q68D85 454 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 OSR2Q8N2R0 312 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 LMX1AQ8TE12 382 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 BORCS8Q96FH0 119 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 ST3GAL6Q9Y274 331 aa12.91□□□□□ -0.34
XRCC1-201ENST00000262887 CEBPZOSA8MTT3 80 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 HLA-HP01893 362 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 FGF5P12034 268 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 CCKARP32238 428 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-201ENST00000262887 PRSS12P56730 875 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 EXT1Q16394 746 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 SLC25A53Q5H9E4 307 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 Q6ZSR3 168 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM170AQ8WVE7 144 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 NAT6Q93015 286 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 GPR27Q9NS67 375 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 NAT8Q9UHE5 227 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 GZMHP20718 246 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 IDH3GP51553 393 aaPredicted RBP12.9□□□□□ -0.34
XRCC1-201ENST00000262887 MALLQ13021 153 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 HERPUD1Q15011 391 aa12.9□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF774Q6NX45 483 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms