RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 MYDGFQ969H8 173 aa13.42□□□□□ -0.26
CGREF1-201ENST00000260595 TMEM106AQ96A25 262 aa13.42□□□□□ -0.26
CGREF1-201ENST00000260595 IFT22Q9H7X7 185 aa13.42□□□□□ -0.26
CGREF1-201ENST00000260595 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
CGREF1-201ENST00000260595 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
CGREF1-201ENST00000260595 NOTCH3Q9UM47 2321 aa13.42□□□□□ -0.26
CGREF1-201ENST00000260595 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
CGREF1-201ENST00000260595 TRAV39A0A0B4J263 110 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 A0A1W2PPI3 338 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 TCRBV4S1A1TA0A5B7 111 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 M0QZK8 103 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 OGG1O15527 345 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 CDRT1O95170 752 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 HTR3BO95264 441 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 IGLL1P15814 213 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 DCKP27707 260 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 NHLRC3Q5JS37 347 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 SUMF2Q8NBJ7 301 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 OR10A7Q8NGE5 316 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 SGCDQ92629 289 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 TOMM40LQ969M1 308 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 RPEQ96AT9 228 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 FAM192AQ9GZU8 254 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 TMEM138Q9NPI0 162 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 PCDHB16Q9NRJ7 776 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
CGREF1-201ENST00000260595 IL36GQ9NZH8 169 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 ST3GAL6Q9Y274 331 aa13.41□□□□□ -0.26
CGREF1-201ENST00000260595 PIN1P1O15428 100 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 LALBAP00709 142 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 CD2P06729 351 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
CGREF1-201ENST00000260595 CD33P20138 364 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 SSTR5P35346 364 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 LTC4SQ16873 150 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 SLC16A12Q6ZSM3 486 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 DRAM1Q8N682 238 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 OR56B4Q8NH76 319 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 MRAPQ8TCY5 172 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 RDH12Q96NR8 316 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 DPCDQ9BVM2 203 aaPredicted RBP13.4□□□□□ -0.26
CGREF1-201ENST00000260595 METTL9Q9H1A3 318 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 BABAM2Q9NXR7 383 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 ING4Q9UNL4 249 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 MOB4Q9Y3A3 225 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 AMMECR1Q9Y4X0 333 aaPredicted RBP13.4□□□□□ -0.26
CGREF1-201ENST00000260595 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
CGREF1-201ENST00000260595 CLIC3O95833 236 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 PF4V1P10720 104 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 IGFBP3P17936 291 aaPredicted RBP13.39□□□□□ -0.27
CGREF1-201ENST00000260595 ZNF93P35789 620 aaPredicted RBP13.39□□□□□ -0.27
CGREF1-201ENST00000260595 RBM11P57052 281 aaKnown RBP13.39□□□□□ -0.27
CGREF1-201ENST00000260595 LOXL3P58215 753 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 MADCAM1Q13477 382 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 C9orf152Q5JTZ5 239 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 TMPRSS11AQ6ZMR5 421 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 OSR2Q8N2R0 312 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 ZNF555Q8NEP9 628 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 OR13C5Q8NGS8 318 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 OR52N1Q8NH53 320 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 SMIM19Q96E16 107 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 DIMT1Q9UNQ2 313 aaKnown RBP13.39□□□□□ -0.27
CGREF1-201ENST00000260595 ZNF281Q9Y2X9 895 aa13.39□□□□□ -0.27
CGREF1-201ENST00000260595 TRBV5-5A0A0J9YX44 114 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 C15orf65H3BRN8 121 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 GEMIN2O14893 280 aaKnown RBP13.38□□□□□ -0.27
CGREF1-201ENST00000260595 BAG2O95816 211 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 GZMHP20718 246 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 BDKRB2P30411 391 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 GNG10P50151 68 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 RAB7AP51149 207 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 RPS11P62280 158 aaKnown RBP eCLIP13.38□□□□□ -0.27
CGREF1-201ENST00000260595 DMKNQ6E0U4 476 aaPredicted RBP13.38□□□□□ -0.27
CGREF1-201ENST00000260595 OR8H3Q8N146 312 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 C5orf56Q8N8D9 126 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 ZNF485Q8NCK3 441 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 GHSRQ92847 366 aa13.38□□□□□ -0.27
CGREF1-201ENST00000260595 A0A1W2PP11 408 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 A0A1W2PPE3 182 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 GPX5O75715 221 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 OR7C1O76099 320 aaPredicted RBP13.37□□□□□ -0.27
CGREF1-201ENST00000260595 PPP3R1P63098 170 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 LINC00596Q86U02 117 aa13.37□□□□□ -0.27
CGREF1-201ENST00000260595 EXOSC1Q9Y3B2 195 aaKnown RBP13.37□□□□□ -0.27
CGREF1-201ENST00000260595 TMEM30CPA0ZSE6 113 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 IRGMA1A4Y4 181 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 FGF16O43320 207 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 PF4P02776 101 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 CSTBP04080 98 aaKnown RBP13.36□□□□□ -0.27
CGREF1-201ENST00000260595 TMEM11P17152 192 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 SERPINA2P20848 420 aa13.36□□□□□ -0.27
CGREF1-201ENST00000260595 ZNF816Q0VGE8 651 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms