RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MRPL21Q7Z2W9 205 aaKnown RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 ADPRHL1Q8NDY3 354 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 MSI2Q96DH6 328 aaKnown RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SSX3Q99909 188 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 PRO3102Q9H379 93 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 TUBD1Q9UJT1 453 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 A0A0G2JMM0 328 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1W2PPB8 328 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1W2PRS3 328 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 KIR3DP1A8MWS1 328 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SRFP11831 508 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 NR2C1P13056 603 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SUMO3P55854 103 aaPredicted RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 PSG4Q00888 419 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 IL13RA2Q14627 380 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 RPS19BP1Q86WX3 136 aaKnown RBP10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SPIN2AQ99865 258 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 SPIN2BQ9BPZ2 258 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 WASF3Q9UPY6 502 aa10.33□□□□□ -0.76
USHBP1-201ENST00000252597 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 CYTIPO60759 359 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BKO60814 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 TMEM50AO95807 157 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BJP06899 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BOP23527 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 GDF1P27539 372 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 TLE4Q04727 773 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF808Q8N4W9 903 aaPredicted RBP10.32□□□□□ -0.76
USHBP1-201ENST00000252597 FRZBQ92765 325 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 RBMXL1Q96E39 390 aaKnown RBP10.32□□□□□ -0.76
USHBP1-201ENST00000252597 FOXB1Q99853 325 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 OR14J1Q9UGF5 321 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 TMED3Q9Y3Q3 217 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 POMT1Q9Y6A1 747 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 CD300LBA8K4G0 201 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF732B4DXR9 585 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 LYL1P12980 280 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 PTGDSP41222 190 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 FIP1L1Q6UN15 594 aaKnown RBP10.32□□□□□ -0.76
USHBP1-201ENST00000252597 HEPN1Q6WQI6 88 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 GINS3Q9BRX5 216 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 CFAP47Q6ZTR5 3102 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 NUP210LQ5VU65 1888 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1W2PQM1 296 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 CLDN1O95832 211 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 SELEP16581 610 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 EGR1P18146 543 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 G0S2P27469 103 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 RTP5Q14D33 572 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 LFNGQ8NES3 379 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 PSMF1Q92530 271 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 RNF122Q9H9V4 155 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 FBLN5Q9UBX5 448 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF318Q5VUA4 2279 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 PCNX1Q96RV3 2341 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 A0A087X0M5 115 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 A0A1B0GX30 115 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 K7N7A8 449 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 P04436 131 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 PSG2P11465 335 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 FOSL1P15407 271 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 ECI1P42126 302 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 LSM6P62312 80 aaKnown RBP10.31□□□□□ -0.76
USHBP1-201ENST00000252597 RAB1AP62820 205 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 HLA-DRB3P79483 266 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 C3AR1Q16581 482 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-201ENST00000252597 SPSB1Q96BD6 273 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 MUCL1Q96DR8 90 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 SLC25A22Q9H936 323 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 USF3Q68DE3 2245 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 SIRPB1O00241 398 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 IGHV3-13P01766 116 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 SRP19P09132 144 aaKnown RBP10.31□□□□□ -0.76
USHBP1-201ENST00000252597 NTF4P34130 210 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-201ENST00000252597 SSR4P51571 173 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 ELOBQ15370 118 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 RTL6Q6ICC9 239 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 TCEAL6Q6IPX3 200 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 ZNF100Q8IYN0 542 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
USHBP1-201ENST00000252597 PACRGQ96M98 296 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms