RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CST11Q9H112 138 aa10.36□□□□□ -0.75
VPREB3-201ENST00000248948 SLITRK2Q9H156 845 aa10.36□□□□□ -0.75
VPREB3-201ENST00000248948 LINC00574Q9H8X3 128 aa10.36□□□□□ -0.75
VPREB3-201ENST00000248948 RAB18Q9NP72 206 aa10.36□□□□□ -0.75
VPREB3-201ENST00000248948 KIF25Q9UIL4 384 aa10.36□□□□□ -0.75
VPREB3-201ENST00000248948 RRP15Q9Y3B9 282 aaKnown RBP10.36□□□□□ -0.75
VPREB3-201ENST00000248948 MEIKINA0A087WXM9 373 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 TMEM30CPA0ZSE6 113 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 IL1AP01583 271 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 MGMTP16455 207 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 CDK2P24941 298 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 DYNLT3P51808 116 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 GP2P55259 537 aaKnown RBP10.35□□□□□ -0.75
VPREB3-201ENST00000248948 RPS25P62851 125 aaKnown RBP10.35□□□□□ -0.75
VPREB3-201ENST00000248948 RELBQ01201 579 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 C1orf100Q5SVJ3 147 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 SLC35E4Q6ICL7 350 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 LHFPL4Q7Z7J7 247 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 SVOPQ8N4V2 548 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 OR10A7Q8NGE5 316 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 OR6M1Q8NGM8 313 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 PLPPR1Q8TBJ4 325 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 ZNF596Q8TC21 504 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 Q96M66 194 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 SSX3Q99909 188 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 BEX1Q9HBH7 125 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 ACOT13Q9NPJ3 140 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 CALYQ9NYX4 217 aa10.35□□□□□ -0.75
VPREB3-201ENST00000248948 SLC22A1O15245 554 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 MMP23AO75900 390 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 CGB3P0DN86 165 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 CGB7P0DN87 165 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 CD37P11049 281 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 SRMP19623 302 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 MDKP21741 143 aaPredicted RBP10.34□□□□□ -0.75
VPREB3-201ENST00000248948 HTR1DP28221 377 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 MAP2K4P45985 399 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 DYNC1I2Q13409 638 aaKnown RBP10.34□□□□□ -0.75
VPREB3-201ENST00000248948 RBM39Q14498 530 aaKnown RBP10.34□□□□□ -0.75
VPREB3-201ENST00000248948 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 OR4P4Q8NGL7 312 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 FCGR1BQ92637 280 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 CREB3L1Q96BA8 519 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 KIRREL1Q96J84 757 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
VPREB3-201ENST00000248948 RANBP3Q9H6Z4 567 aaPredicted RBP10.34□□□□□ -0.75
VPREB3-201ENST00000248948 NDUFB11Q9NX14 153 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 ZNF581Q9P0T4 197 aa10.34□□□□□ -0.75
VPREB3-201ENST00000248948 CLPSL1A2RUU4 121 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 NPIPB11E5RHQ5 1161 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 CA11O75493 328 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 CRTAPO75718 401 aaPredicted RBP10.33□□□□□ -0.76
VPREB3-201ENST00000248948 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 GLAP06280 429 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 RANBP1P43487 201 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ARHGDIBP52566 201 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 LDLRAD2Q5SZI1 272 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ATAD3CQ5T2N8 411 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ZNF497Q6ZNH5 498 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 GAPTQ8N292 157 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ABHD12Q8N2K0 398 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM104Q8NE00 496 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 NDNFQ8TB73 568 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 NEK7Q8TDX7 302 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 WFDC12Q8WWY7 111 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 TMEM203Q969S6 136 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 SELENOIQ9C0D9 397 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ZNF286AQ9HBT8 521 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ABCB10Q9NRK6 738 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 ING3Q9NXR8 418 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 PITPNC1Q9UKF7 332 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 TCF19Q9Y242 345 aa10.33□□□□□ -0.76
VPREB3-201ENST00000248948 MCRIP1C9JLW8 97 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 AIPO00170 330 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 TSPAN9O75954 239 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 BPNT1O95861 308 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 GALP22466 123 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 OMGP23515 440 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 HTR2CP28335 458 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 SSTR5P35346 364 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 GDNFP39905 211 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 CEACAM3P40198 252 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 FABP5Q01469 135 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 EMX1Q04741 257 aaPredicted RBP10.32□□□□□ -0.76
VPREB3-201ENST00000248948 FAM189A2Q15884 450 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 SSX1Q16384 188 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 SSX2Q16385 188 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 HLA-DRB5Q30154 266 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 OLFML2AQ68BL7 652 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 RAB12Q6IQ22 244 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 TRAT1Q6PIZ9 186 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
VPREB3-201ENST00000248948 SLC16A12Q6ZSM3 486 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms