RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SGPP2Q8IWX5 399 aa19.71■□□□□ 0.75
SYNGR3-201ENST00000248121 OR10C1Q96KK4 312 aa19.71■□□□□ 0.75
SYNGR3-201ENST00000248121 NMES1Q9C002 83 aa19.71■□□□□ 0.75
SYNGR3-201ENST00000248121 RIMS4Q9H426 269 aaPredicted RBP19.71■□□□□ 0.75
SYNGR3-201ENST00000248121 COMMD9Q9P000 198 aa19.71■□□□□ 0.75
SYNGR3-201ENST00000248121 ICE1Q9Y2F5 2266 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 RCC1P18754 421 aaPredicted RBP19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 CHRNB4P30926 498 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 ASCL1P50553 236 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 RBM39Q14498 530 aaKnown RBP19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 PLPPR1Q8TBJ4 325 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 PIK3IP1Q96FE7 263 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 ARL6Q9H0F7 186 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 TMEM165Q9HC07 324 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 SLC2A9Q9NRM0 540 aa19.7■□□□□ 0.74
SYNGR3-201ENST00000248121 TEX13DA0A0J9YY54 714 aaPredicted RBP19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 DPRXA6NFQ7 191 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 WNT9BO14905 357 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 BET1O15155 118 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 PHLDA2Q53GA4 152 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 OR5T2Q8NGG2 359 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 OR11L1Q8NGX0 322 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 PRR7Q8TB68 274 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 RTN4IP1Q8WWV3 396 aaPredicted RBP19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 RSRP1Q9BUV0 290 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 TNFSF18Q9UNG2 199 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 KIR2DS1A0A191URI9 304 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 C4BPBP20851 252 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 KIR2DS4P43632 304 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 KIR2DS1Q14954 304 aa19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 PAN3Q58A45 887 aaKnown RBP19.69■□□□□ 0.74
SYNGR3-201ENST00000248121 ZNF250P15622 560 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 WDR82Q6UXN9 313 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 SLC38A6Q8IZM9 456 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 FAM210AQ96ND0 272 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 NAA60Q9H7X0 242 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 RASL12Q9NYN1 266 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 ARID1AO14497 2285 aa19.68■□□□□ 0.74
SYNGR3-201ENST00000248121 TUSC2O75896 110 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 HOXB5P09067 269 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 GNLYP22749 145 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 KCNJ3P48549 501 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 CEBPDP49716 269 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 AP2S1P53680 142 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 HERV-K104P61576 105 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 BSPH1Q075Z2 132 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 ABCA11PQ4W5N1 156 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 SPIN3Q5JUX0 258 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 TMEM171Q8WVE6 324 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 GALNT14Q96FL9 552 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 SYT3Q9BQG1 590 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 UFSP2Q9NUQ7 469 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 MBD2Q9UBB5 411 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 RNF222A6NCQ9 220 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 TK1P04183 234 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 PSMB6P28072 239 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 IL15RAQ13261 267 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 ATXN7L3Q14CW9 347 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 SP6Q3SY56 376 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 GAPTQ8N292 157 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 SPERTQ8NA61 448 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 METTL8Q9H825 291 aaKnown RBP19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 C1orf123Q9NWV4 160 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 TREM2Q9NZC2 230 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 DUSP13Q9UII6 198 aa19.67■□□□□ 0.74
SYNGR3-201ENST00000248121 TRAV39A0A0B4J263 110 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 A6NLC8 198 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 ABCD4O14678 606 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 IFNA7P01567 189 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 OR5AC1P0C628 307 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 GNRHRP30968 328 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 GLRXP35754 106 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 TMEM187Q14656 261 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 SHEQ5VZ18 495 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 ZNF497Q6ZNH5 498 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 RNF126Q9BV68 326 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 COQ3Q9NZJ6 369 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 HCFC1P51610 2035 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 IGKV1D-13A0A0B4J2D9 117 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 H0YIZ8 118 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 SH2D1BO14796 132 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 HAND1O96004 215 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 IGKV1-13P0DP09 117 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 CYCSP99999 105 aaKnown RBP19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 LINC01560Q8TB33 94 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 ZFYVE26Q68DK2 2539 aa19.66■□□□□ 0.74
SYNGR3-201ENST00000248121 PSPNO60542 156 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 IGHV3-13P01766 116 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 MDH2P40926 338 aaKnown RBP19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 HLA-DRB3P79483 266 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 FAM219AQ8IW50 185 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 OR8H3Q8N146 312 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 C2orf50Q96LR7 162 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 BBC3Q96PG8 261 aaPredicted RBP19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 OR14J1Q9UGF5 321 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 ROS1P08922 2347 aa19.65■□□□□ 0.74
SYNGR3-201ENST00000248121 RPS10-NUDT3A0A1W2PQS6 291 aa19.64■□□□□ 0.74
SYNGR3-201ENST00000248121 ZSCAN5BA6NJL1 495 aa19.64■□□□□ 0.74
SYNGR3-201ENST00000248121 KCNAB3O43448 404 aa19.64■□□□□ 0.74
SYNGR3-201ENST00000248121 TLE1Q04724 770 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms