RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 MMP9P14780 707 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 SUCLG1P53597 346 aaKnown RBP11.88□□□□□ -0.51
NCLN-201ENST00000246117 DEFB109BQ30KR1 87 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 UQCC3Q6UW78 93 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 C1orf210Q8IVY1 113 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 ABHD5Q8WTS1 349 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 TMED3Q9Y3Q3 217 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 PMS2P1A4D2B8 440 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 ATXN7O15265 892 aaPredicted RBP11.88□□□□□ -0.51
NCLN-201ENST00000246117 PSG2P11465 335 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 ZNF708P17019 499 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 ENDOGQ14249 297 aaKnown RBP11.88□□□□□ -0.51
NCLN-201ENST00000246117 VAX1Q5SQQ9 334 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 DHRS11Q6UWP2 260 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 PSG11Q9UQ72 335 aa11.88□□□□□ -0.51
NCLN-201ENST00000246117 IGHV1-45A0A0A0MS14 117 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 SPRY3O43610 288 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 ACTL6BO94805 426 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 NDUFB7P17568 137 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 IGFBP3P17936 291 aaPredicted RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 OR4A16Q8NH70 328 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 SH2D1BO14796 132 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 DFFBO76075 338 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 HKR1P10072 659 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 FOXG1P55316 489 aaPredicted RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 ZNF345Q14585 488 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 BMPERQ8N8U9 685 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 H1FXQ92522 213 aaKnown RBP11.87□□□□□ -0.51
NCLN-201ENST00000246117 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 PRO1933Q9H354 126 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 HSF4Q9ULV5 492 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 SHISA7A6NL88 538 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 H7BYZ3 331 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 EDEM2Q9BV94 578 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 OR2D2Q9H210 308 aa11.87□□□□□ -0.51
NCLN-201ENST00000246117 DVL1O14640 695 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 IRF2P14316 349 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 Q3ZCU0 254 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 TMEM178AQ8NBL3 297 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
NCLN-201ENST00000246117 OR2Z1Q8NG97 314 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 A0A1W2PPE3 182 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 YIF1AO95070 293 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 SNCAP37840 140 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 FGFBP3Q8TAT2 258 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 ASB13Q8WXK3 278 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 PTX4Q96A99 478 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 MUCL1Q96DR8 90 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 DMRTA2Q96SC8 542 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 RTBDNQ9BSG5 229 aaPredicted RBP11.86□□□□□ -0.51
NCLN-201ENST00000246117 RNF126Q9BV68 326 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 CACNA1AO00555 2505 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 SULT1A1P50225 295 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 PMS2CLQ68D20 193 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 DNASE2BQ8WZ79 361 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 GNPNAT1Q96EK6 184 aaPredicted RBP11.86□□□□□ -0.51
NCLN-201ENST00000246117 BSCL2Q96G97 398 aaPredicted RBP11.86□□□□□ -0.51
NCLN-201ENST00000246117 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
NCLN-201ENST00000246117 KIAA1671Q9BY89 1806 aa11.86□□□□□ -0.51
NCLN-201ENST00000246117 PLXNA2O75051 1894 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 E9PLN8 166 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 H0YL77 283 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 PHOX2AO14813 284 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
NCLN-201ENST00000246117 LY86O95711 162 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 COX6A1P12074 109 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 ARR3P36575 388 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 ZNF83P51522 516 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 HMGN3Q15651 99 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 ZNF561Q8N587 486 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 SLC2A8Q9NY64 477 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 VCANP13611 3396 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 A8MXK9 166 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 M0R1B8 84 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 ZIC3O60481 467 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 FABP4P15090 132 aa11.85□□□□□ -0.51
NCLN-201ENST00000246117 DEFA6Q01524 100 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms