RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PPP5CP53041 499 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 ASPHD2Q6ICH7 369 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 CLEC18BQ6UXF7 455 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 RBMS3Q6XE24 437 aaKnown RBP9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 CLEC18CQ8NCF0 446 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR2AK2Q8NG84 335 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR52I2Q8NH67 350 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 SLC25A28Q96A46 364 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 KIRREL1Q96J84 757 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 REG4Q9BYZ8 158 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 TAF9BQ9HBM6 251 aa9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZNF230Q9UIE0 474 aaPredicted RBP9.31□□□□□ -0.92
TNFAIP3-201ENST00000237289 USP9YO00507 2555 aaPredicted RBP9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 RAB27BO00194 218 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 CHATP28329 748 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 GDNFP39905 211 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 NR2C2APQ86WQ0 139 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR4S1Q8NGB4 309 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 CLDND2Q8NHS1 167 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 EDARADDQ8WWZ3 215 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 CCDC32Q9BV29 185 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 K7N7A8 449 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 PTHLHP12272 177 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 ERVFRD-1P60508 538 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 WDR25Q64LD2 544 aaPredicted RBP9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 TGIF2LYQ8IUE0 185 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 SLC6A7Q99884 636 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 FBLN5Q9UBX5 448 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 SLC33A1O00400 549 aaPredicted RBP9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 PMP2P02689 132 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZBTB25P24278 435 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 PRRX1P54821 245 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 MOGAT2Q3SYC2 334 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 ASCL4Q6XD76 172 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 CMTM1Q8IZ96 169 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 FGF23Q9GZV9 251 aaPredicted RBP9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 ITPR1Q14643 2758 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 LYPD2Q6UXB3 125 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZNF788Q6ZQV5 615 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 CD177Q8N6Q3 437 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR13D1Q8NGV5 346 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 C10orf105Q8TEF2 133 aa9.3□□□□□ -0.92
TNFAIP3-201ENST00000237289 IGKV1D-17A0A075B6S4 117 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZNF728P0DKX0 622 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 CD40LGP29965 261 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 TEX36Q5VZQ5 186 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 LINC00299Q6ZSB3 139 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 MAPK1IP1LQ8NDC0 245 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR10V1Q8NGI7 309 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZDHHC16Q969W1 377 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 SDSLQ96GA7 329 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 MAB21L2Q9Y586 359 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 HELZ2Q9BYK8 2649 aaKnown RBP9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 OVOL3O00110 214 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 SELLP14151 372 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 MEF2CQ06413 473 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 GPR157Q5UAW9 335 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 STUMQ69YW2 141 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 PLET1Q6UQ28 207 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 UXS1Q8NBZ7 420 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 SLC25A38Q96DW6 304 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 C7orf69Q9H7B7 122 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 IGHV3-43A0A0B4J1X8 118 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 A0A1W2PRD5 423 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 A0A1W2PRF3 423 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 A0A1W2PRM7 423 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 TRDCB7Z8K6 153 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 IGHV3-43DP0DP04 118 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 RAB25P57735 213 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 DGCR2P98153 550 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 CYB5R2Q6BCY4 276 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 STEAP1BQ6NZ63 245 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 GAFA1Q96PS6 74 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 PRRT1Q99946 306 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 HDHD3Q9BSH5 251 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 YAE1D1Q9NRH1 226 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
TNFAIP3-201ENST00000237289 BTBD17A6NE02 478 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 DTYMKP23919 212 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 GNG10P50151 68 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 ERVK11-1P61568 191 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 HOXA4Q00056 320 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 SCGB2A2Q13296 93 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 FAM166AQ6J272 317 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 PDZD9Q8IXQ8 264 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 ZFAND2BQ8WV99 257 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 SECTM1Q8WVN6 248 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 WDFY2Q96P53 400 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 TRAV24A0A0B4J272 114 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 OR5H8P0DN80 308 aa9.28□□□□□ -0.92
TNFAIP3-201ENST00000237289 EPHA1P21709 976 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms