RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PPP1CBP62140 327 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 TLE3Q04726 772 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 PLPPR5Q32ZL2 321 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 RAET1LQ5VY80 246 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 NRSN1Q8IZ57 195 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 SIGLECL1Q8N7X8 197 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 LMLNQ96KR4 655 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
MSH2-201ENST00000233146 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
MSH2-201ENST00000233146 ZNF878C9JN71 531 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 CD99P14209 185 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
MSH2-201ENST00000233146 DUSP3P51452 185 aaPredicted RBP11.25□□□□□ -0.61
MSH2-201ENST00000233146 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 PLSCR4Q9NRQ2 329 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 TRPM6Q9BX84 2022 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 VENTXO95231 258 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 SARAFQ96BY9 339 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 ZDHHC11Q9H8X9 412 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 M0R296 226 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 SSSCA1O60232 199 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 NKX2-2O95096 273 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 HLA-HP01893 362 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 Q0VG73 95 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 ASB10Q8WXI3 467 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
MSH2-201ENST00000233146 ARID1BQ8NFD5 2236 aaPredicted RBP11.25□□□□□ -0.61
MSH2-201ENST00000233146 RBFOX2O43251 390 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSH2-201ENST00000233146 OR7C2O60412 319 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ZNF253O75346 499 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 TMEM50AO95807 157 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 IGKV1D-16P01601 117 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 GLI4P10075 376 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 MSR1P21757 451 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 OR3A4PP47883 348 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 CLDN15P56746 228 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ZNF154Q13106 437 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ABCA11PQ4W5N1 156 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 RSG1Q9BU20 258 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 PPIAL4GP0DN37 164 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 CTSEP14091 401 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 PECRQ9BY49 303 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
MSH2-201ENST00000233146 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 F2Z2F3 143 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ZNF728P0DKX0 622 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 OR1D2P34982 312 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 POU3F1Q03052 451 aaPredicted RBP11.24□□□□□ -0.61
MSH2-201ENST00000233146 BAGE3Q86Y29 109 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 BAGE2Q86Y30 109 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 C11orf40Q8WZ69 217 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 ARRDC3Q96B67 414 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
MSH2-201ENST00000233146 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 B3GALT1Q9Y5Z6 326 aa11.24□□□□□ -0.61
MSH2-201ENST00000233146 HTTP42858 3142 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 A0A1B0GV72 72 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 ZP4Q12836 540 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 BATF2Q8N1L9 274 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 MRPL30Q8TCC3 161 aaKnown RBP11.23□□□□□ -0.61
MSH2-201ENST00000233146 ADIPOR1Q96A54 375 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
MSH2-201ENST00000233146 GJE1A6NN92 205 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 G3V3Y1 287 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 CXCL11O14625 94 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 MLNRO43193 412 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 ANOS1P23352 680 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 CLDN17P56750 224 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 ZNF141Q15928 474 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 PSG3Q16557 428 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 CLLU1OSQ5K130 101 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 C7orf61Q8IZ16 206 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
MSH2-201ENST00000233146 FAM60AQ9NP50 221 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 CLEC1BQ9P126 229 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 KLHL13Q9P2N7 655 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 TBL2Q9Y4P3 447 aaKnown RBP11.23□□□□□ -0.61
MSH2-201ENST00000233146 HCFC2Q9Y5Z7 792 aa11.23□□□□□ -0.61
MSH2-201ENST00000233146 TRAF3IP2O43734 574 aaPredicted RBP11.22□□□□□ -0.61
MSH2-201ENST00000233146 SLC16A7O60669 478 aa11.22□□□□□ -0.61
MSH2-201ENST00000233146 EGR4Q05215 589 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms