RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 ISOC1Q96CN7 298 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
UPK1A-201ENST00000222275 RAB9BQ9NP90 201 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 UBE2J1Q9Y385 318 aaPredicted RBP11.23□□□□□ -0.61
UPK1A-201ENST00000222275 AUP1Q9Y679 476 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 LINC00312Q9Y6C7 94 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 CEPT1Q9Y6K0 416 aa11.23□□□□□ -0.61
UPK1A-201ENST00000222275 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 A6NJ64 397 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 FCN3O75636 299 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 RBP4P02753 201 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
UPK1A-201ENST00000222275 EPHA1P21709 976 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 VEGFCP49767 419 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 AESQ08117 197 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
UPK1A-201ENST00000222275 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 Q6ZTK2 550 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
UPK1A-201ENST00000222275 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 CORO2AQ92828 525 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 ATG5Q9H1Y0 275 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 GAL3ST2Q9H3Q3 398 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 TAS2R3Q9NYW6 316 aa11.22□□□□□ -0.61
UPK1A-201ENST00000222275 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
UPK1A-201ENST00000222275 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 ODAMA1E959 279 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 H3BMQ9 156 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 HSPB6O14558 160 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 GZMHP20718 246 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 CHATP28329 748 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
UPK1A-201ENST00000222275 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 TRAT1Q6PIZ9 186 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 TRAPPC6BQ86SZ2 158 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 OR4M1Q8NGD0 313 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 OR10R2Q8NGX6 335 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 NDNFQ8TB73 568 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 RAB3CQ96E17 227 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 S100A16Q96FQ6 103 aaKnown RBP11.21□□□□□ -0.61
UPK1A-201ENST00000222275 ZNF714Q96N38 554 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 SLC6A7Q99884 636 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 NICN1Q9BSH3 213 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 KCNK15Q9H427 330 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 METTL8Q9H825 291 aaKnown RBP11.21□□□□□ -0.61
UPK1A-201ENST00000222275 DIABLOQ9NR28 239 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 C19orf12Q9NSK7 152 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 RHBDL2Q9NX52 303 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
UPK1A-201ENST00000222275 A0A0B4J203 849 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 SERPINE3A8MV23 424 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 TOX4O94842 621 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 PAHP00439 452 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 BPIFB3P59826 476 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 ARF6P62330 175 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 UBE2NLQ5JXB2 153 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 RSBN1Q5VWQ0 802 aaPredicted RBP11.2□□□□□ -0.62
UPK1A-201ENST00000222275 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 SIGIRRQ6IA17 410 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF554Q86TJ5 538 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 FGFRL1Q8N441 504 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 NANPQ8TBE9 248 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 DGCR14Q96DF8 476 aaKnown RBP11.2□□□□□ -0.62
UPK1A-201ENST00000222275 COQ2Q96H96 371 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
UPK1A-201ENST00000222275 WDFY2Q96P53 400 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF69Q9UC07 566 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 MGAT4AQ9UM21 535 aa11.2□□□□□ -0.62
UPK1A-201ENST00000222275 UBE2QL1A1L167 161 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF729A6NN14 1252 aaPredicted RBP11.19□□□□□ -0.62
UPK1A-201ENST00000222275 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
UPK1A-201ENST00000222275 RAB27BO00194 218 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 SOCS1O15524 211 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 GLIPR1P48060 266 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 ERVFRD-1P60508 538 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 SPCS2Q15005 226 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 OR52W1Q6IF63 320 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 ZNF497Q6ZNH5 498 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 C6orf201Q7Z4U5 140 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 GAPTQ8N292 157 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 TAF15Q92804 592 aaKnown RBP eCLIP11.19□□□□□ -0.62
UPK1A-201ENST00000222275 UPRTQ96BW1 309 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
UPK1A-201ENST00000222275 ABCG5Q9H222 651 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 UNKLQ9H9P5 680 aaKnown RBP11.19□□□□□ -0.62
UPK1A-201ENST00000222275 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 KIF25Q9UIL4 384 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
UPK1A-201ENST00000222275 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms