RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DSPP15924 2871 aaKnown RBP10.44□□□□□ -0.74
CHPF2-201ENST00000035307 USP9YO00507 2555 aaPredicted RBP10.44□□□□□ -0.74
CHPF2-201ENST00000035307 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
CHPF2-201ENST00000035307 RNASEK-C17orf49H0YIS7 233 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 NPIPB7O75200 414 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 CEACAM6P40199 344 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 NHLH2Q02577 135 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 MSMO1Q15800 293 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 MUC22E2RYF6 1773 aaPredicted RBP10.43□□□□□ -0.74
CHPF2-201ENST00000035307 SH2D1BO14796 132 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 OR3A1P47881 315 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 CEBPDP49716 269 aaPredicted RBP10.43□□□□□ -0.74
CHPF2-201ENST00000035307 FAM122CQ6P4D5 195 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 PRSS54Q6PEW0 395 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 MDP1Q86V88 176 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 SERTAD4Q9NUC0 356 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 NKX2-6A6NCS4 301 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 TRIM77I1YAP6 450 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 S100PP25815 95 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 SCAND1P57086 179 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 UBE2G2P60604 165 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 LY6DQ14210 128 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 PLGLAQ15195 96 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 TEX30Q5JUR7 227 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 MYPOPQ86VE0 399 aaPredicted RBP10.43□□□□□ -0.74
CHPF2-201ENST00000035307 STPG2Q8N412 459 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 BVESQ8NE79 360 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 NIPSNAP3BQ9BS92 247 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 OR2J1Q9GZK6 312 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 RAB18Q9NP72 206 aa10.43□□□□□ -0.74
CHPF2-201ENST00000035307 C3orf85A0A1B0GTC6 90 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 UBE2L5PA0A1B0GUS4 154 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 AQP7O14520 342 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 SYNGR1O43759 233 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 GLAP06280 429 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZP3P21754 424 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ACKR3P25106 362 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 HBG1P69891 147 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 HBG2P69892 147 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZP4Q12836 540 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF826PQ6ZT77 177 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 TBC1D26Q86UD7 250 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF610Q8N9Z0 462 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF391Q9UJN7 358 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 MAP1AP78559 2803 aaPredicted RBP10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF106Q9H2Y7 1883 aaKnown RBP10.42□□□□□ -0.74
CHPF2-201ENST00000035307 TERTO14746 1132 aaKnown RBP10.42□□□□□ -0.74
CHPF2-201ENST00000035307 PPYP01298 95 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 CRYAAP02489 173 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 SCTP09683 121 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 RUNX1Q01196 453 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 C5orf24Q7Z6I8 188 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 OR4A16Q8NH70 328 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 C5orf66Q9H5L9 145 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 UNKLQ9H9P5 680 aaKnown RBP10.42□□□□□ -0.74
CHPF2-201ENST00000035307 POLDIP2Q9Y2S7 368 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ATP23Q9Y6H3 246 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 MSGN1A6NI15 193 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 SNCAP37840 140 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 HOXA1P49639 335 aaPredicted RBP10.42□□□□□ -0.74
CHPF2-201ENST00000035307 ERVS71-1P61550 626 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 SRPXP78539 464 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 RBPJQ06330 500 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 FANCFQ9NPI8 374 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 PSENENQ9NZ42 101 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 PIPOXQ9P0Z9 390 aa10.42□□□□□ -0.74
CHPF2-201ENST00000035307 SPINT2O43291 252 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 HEXAP06865 529 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FHL1Q13642 323 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FAM27BQ5VT28 67 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 LHX4Q969G2 390 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 PSG11Q9UQ72 335 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 SONP18583 2426 aaKnown RBP10.41□□□□□ -0.74
CHPF2-201ENST00000035307 CLEC18AA5D8T8 446 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FAM74A7A6NL05 159 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF705GA8MUZ8 300 aaPredicted RBP10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ZBTB25P24278 435 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FHITP49789 147 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 F2RL1P55085 397 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 MPPED2Q15777 294 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 GUK1Q16774 197 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FAM74A3Q4VXF1 159 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FAM24BQ8N5W8 94 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 CLEC18CQ8NCF0 446 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 OR10S1Q8NGN2 331 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ERGIC1Q969X5 290 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 TNFSF18Q9UNG2 199 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF292O60281 2723 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 FSTP19883 344 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ZNF154Q13106 437 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 IL36RNQ9UBH0 155 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
CHPF2-201ENST00000035307 ATXN7O15265 892 aaPredicted RBP10.41□□□□□ -0.74
CHPF2-201ENST00000035307 CELA3BP08861 270 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms