RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Smim7Q5RKS2 75 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Klf3Q60980 344 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Flrt1Q6RKD8 674 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rnf38Q8BI21 518 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr112Q8C0S2 320 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q8C3M9 231 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr56Q8VGD6 315 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sec11cQ9D8V7 192 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 SrfQ9JM73 504 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Igkv16-104A0A0B4J1I1 116 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Dpagt1P42867 410 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ucp3P56501 308 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r36Q8R2E3 305 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ergic1Q9DC16 290 aaKnown RBP9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 HraslsQ9QZU4 167 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr896-ps1A0A1L1SRZ8 308 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1124A2AT86 318 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ptger4P32240 513 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 ShhQ62226 437 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 NarflQ7TMW6 476 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr996Q7TRA0 314 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r62Q8R2C0 300 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 V1ra11Q8R2E6 318 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr639Q8VGY8 316 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r45Q8VIC7 318 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Slc48a1Q9D8M3 146 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Kif26aQ52KG5 1881 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 SordQ64442 357 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ankrd34cQ8BLB8 534 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PaplnQ9EPX2 1280 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nova1Q9JKN6 507 aaKnown RBP9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Zfp109A0A0U1RPC5 652 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Casp16-psI6L890 176 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q0VG62 139 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PigzQ8BTP0 560 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr113Q8VEU4 312 aa9.42□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Casp8ap2Q9WUF3 1962 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ankrd65F6YK91 380 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cldn20G5E8X0 219 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1279Q8VF38 313 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Thbs4Q9Z1T2 963 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gtf3c1Q8K284 2101 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cabin1G3X8Q1 2187 aaKnown RBP9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Igkv5-39A0A0G2JDV4 115 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 PdgfbP31240 241 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Pcbp3P57722 371 aaKnown RBP9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Col19a1Q0VF58 1136 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 YbeyQ8CAV0 164 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Glipr2Q9CYL5 154 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Zfp942B8JJA7 486 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 HpnO35453 436 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fndc4Q3TR08 231 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 D17Wsu92eQ3TT38 291 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ube3dQ8BX13 368 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Reep6Q9JM62 201 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1326-ps1A0A140T8J7 311 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm14597A2CFG5 200 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 CymB7ZWD6 379 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm9047B9EJX3 177 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Nkx2-2P42586 273 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Fgf17P63075 216 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 March1Q6NZQ8 289 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Crb2Q80YA8 1282 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lhfpl2Q8BGA2 222 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 A730049H05RikQ8C940 139 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Cdc42ep2Q8JZX9 214 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tmeff2Q9QYM9 374 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm12666A2AMD0 254 aaKnown RBP9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Adam6aB2RSY5 754 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tmem182B2RVY9 229 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r91E9PZR7 307 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Igkv7-33P01632 114 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 P01665 111 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 P01666 111 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gng3P63216 75 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Rnf2Q9CQJ4 336 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tmem25Q9DCF1 365 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm5286E0CXI6 357 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Tnfrsf17O88472 185 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Dnmt3bO88509 859 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm10840Q3V2K9 103 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Obox7Q4KL20 218 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 CtsoQ8BM88 312 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sp3O70494 783 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 H2-DMaP28078 261 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Taar9Q5QD04 348 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 HaaoQ78JT3 286 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr1465Q7TQR2 307 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr43Q7TRX1 313 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr403Q7TRX2 313 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Sertad4A7DTG3 377 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ccr2P51683 373 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Lyplal1Q3UFF7 239 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 BC100530Q497J0 97 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r202Q8R259 302 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Gm5218F6YH22 154 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Vmn1r57K7N731 310 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Ube2iP63280 158 aaKnown RBP9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Olfr678Q8VG26 313 aa9.41□□□□□ -0.9
Scn8a-201ENSMUST00000082209 Q9CQT9 129 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms