RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pkd1l2Q7TN88 2461 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ighv1-76A0A0G2JFE9 117 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmem185aA2AF53 350 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1214A2ATG3 311 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Adam6aB2RSY5 754 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr178E9Q9T3 319 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zfp977L7N2E7 438 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 GamtO35969 236 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ca6P18761 317 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gng8P63078 70 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 RhodP97348 210 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hhipl1Q14DK5 791 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr94Q6UAH0 386 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Bpifb3Q80ZU7 473 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Stk17bQ8BG48 372 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Hes7Q8BKT2 225 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Lix1lQ8BQ89 337 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dmrta1Q8CFG4 490 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 SdhaQ8K2B3 664 aaKnown RBP7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr469Q8VF66 314 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr360Q8VFP3 317 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tssk4Q9D411 328 aa7.5□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rd3lB2RV38 197 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Nr1h5E9Q5A6 505 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 C2cd4aE9Q861 334 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Prr23a1G3UW32 258 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm3099J3QPA5 205 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1218L7MU54 311 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gfra3O35118 397 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 H2-DMaP28078 261 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Apoc1P34928 88 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Sult2a1P52843 285 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ppp1cbP62141 327 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm11110Q3U4K9 109 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 1700057G04RikQ3V0U0 232 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Prss46Q5M8S2 314 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Smap2Q7TN29 428 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1216Q7TR05 311 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Tmem5Q8VDX6 444 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Nudcd2Q9CQ48 157 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Plekha3Q9ERS4 297 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Bcl3Q9Z2F6 448 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zzef1Q5SSH7 2924 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr455A0A0B4J1M2 317 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1055A2AVX9 346 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Scml2B1AVB3 969 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 4931429L15RikE9PVU2 379 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm21863J3KMP8 111 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gosr2O35166 212 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 AF067061O70616 171 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Il5P04401 133 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 P04946 108 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Rab22aP35285 194 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dnase2P56542 353 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm826Q3UQ74 109 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Parp16Q7TMM8 322 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 H2-M10.4Q85ZW8 331 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 PcgF3Q8BTQ0 241 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Slc38a2Q8CFE6 504 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 MetrnlQ8VE43 311 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Duoxa1Q8VE49 341 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1324Q8VEU7 332 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr291Q8VF60 317 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Adarb1Q91ZS8 711 aaKnown RBP7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dram2Q9CR48 267 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dcun1d5Q9CXV9 237 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gfod2Q9CYH5 385 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dnajb12Q9QYI4 376 aaKnown RBP7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Dkkl1Q9QZL9 230 aa7.49□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm11127A7VMS2 374 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr251E9Q891 316 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cacng2O88602 323 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 NppaP05125 152 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Zfp27P10077 819 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 S100a6P14069 89 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Cbr1P48758 277 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 BidP70444 195 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 UcnP81615 122 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Shisa3Q3UPR0 238 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Apobec4Q497M3 374 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr93Q6UAH1 312 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Pik3ip1Q7TMJ8 264 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 CenpoQ8K015 298 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn1r72Q8K3N7 306 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Fcrl1Q8R4Y0 343 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Olfr1489Q8VFQ5 313 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Taf9Q8VI33 264 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 D6Wsu163eQ91YN0 552 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Q9CQT6 229 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 MrnipQ9D1F5 335 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ccnl2Q9JJA7 518 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 4930563M21RikA0A1L1SUT5 578 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Ube2dnl2A2AFH2 155 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm14124A2AU83 715 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Skint2A7XUX6 400 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Vmn1r91E9PZR7 307 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Gm8857L7N291 182 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 RrhO35214 337 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Kcnj1O88335 372 aa7.48□□□□□ -1.21
Trim39-201ENSMUST00000042717 Kcnj15O88932 375 aa7.48□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms