RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NXPH3O95157 252 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 F10P00742 488 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 MMP7P09237 267 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 SRD5A2P31213 254 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 RPS18P62269 152 aaKnown RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 RPP30P78346 268 aaKnown RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 CCDC71LQ8N9Z2 235 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 OR2G3Q8NGZ4 309 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 PUS1Q9Y606 427 aaKnown RBP eCLIP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 IGKV1D-13A0A0B4J2D9 117 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 IGKV1-13P0DP09 117 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 CCL2P13500 99 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-233ENST00000642021 CASP6P55212 293 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 Q0VFX4 171 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 SPIN3Q5JUX0 258 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 EXTL1Q92935 676 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
PHGDH-233ENST00000642021 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 SSSCA1O60232 199 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF806P0C7X5 589 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 NQO2P16083 231 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 SPINK2P20155 84 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 BCL3P20749 454 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 EPHA1P21709 976 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 ITGA3P26006 1051 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 HERPUD1Q15011 391 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
PHGDH-233ENST00000642021 GAPTQ8N292 157 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM252Q8N6L7 170 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 OR1J1Q8NGS3 322 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 GTF3AQ92664 365 aaKnown RBP11.88□□□□□ -0.51
PHGDH-233ENST00000642021 NAT6Q93015 286 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 SLAMF9Q96A28 289 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 DEPPQ9NTK1 212 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-233ENST00000642021 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 LRRC3CA6NJW4 275 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 HSPB6O14558 160 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 ADAM20O43506 726 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 DNPH1O43598 174 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 CST7O76096 145 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 CDS2O95674 445 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 OR8U8P0C7N1 319 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 HAGHQ16775 308 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF695Q8IW36 515 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 PBDC1Q9BVG4 233 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 SEBOXQ9HB31 216 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
PHGDH-233ENST00000642021 A0A1B0GV90 55 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 C9J4A7 227 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 RPL36A-HNRNPH2H7BZ11 118 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 PMELP40967 661 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 RPS23P62266 143 aaKnown RBP11.87□□□□□ -0.51
PHGDH-233ENST00000642021 ABLIM2Q6H8Q1 611 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 DPPA2Q7Z7J5 298 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF391Q9UJN7 358 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF407Q9C0G0 2248 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 PINLYPA6NC86 204 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 P04436 131 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 FBP1P09467 338 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 CCNOP22674 350 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 RUNX1Q01196 453 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 RHEBQ15382 184 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 OR2V1Q8NHB1 315 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 SPSB4Q96A44 273 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 SGCZQ96LD1 299 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 SIGLEC12Q96PQ1 595 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 C1QTNF5Q9BXJ0 243 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 PARPBPQ9NWS1 579 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
PHGDH-233ENST00000642021 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 WRBO00258 174 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 OR56B2PQ8NGI1 322 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 Q9N2K0 584 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 LYRM2Q9NU23 88 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-233ENST00000642021 METTL1Q9UBP6 276 aaKnown RBP11.86□□□□□ -0.51
PHGDH-233ENST00000642021 A0A096LPE4 126 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
PHGDH-233ENST00000642021 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms