RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF574Q6ZN55 896 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-216ENST00000639300 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 A0A087WV48 116 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 SPAARA0A1B0GVQ0 90 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 NKX2-6A6NCS4 301 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 DTYMKP23919 212 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 NPBWR1P48145 328 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 ISOC2Q96AB3 205 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 TRGV10A0A0A0MS01 117 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 GNG10P50151 68 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 APCDD1LQ8NCL9 501 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 C10orf35Q96D05 121 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-216ENST00000639300 A0A0B4J293 547 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 SLC38A11Q08AI6 406 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 RTL8BQ17RB0 113 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 OR13D1Q8NGV5 346 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 SLC35B3Q9H1N7 401 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF891A8MT65 544 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-216ENST00000639300 GDF9O60383 454 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 OPN1MWP04001 364 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 ARG1P05089 322 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 KCNJ3P48549 501 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 FGF8P55075 233 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-216ENST00000639300 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 SKA3Q8IX90 412 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 TAAR6Q96RI8 345 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 TGIF2Q9GZN2 237 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 AGFG2O95081 481 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 MBP02144 154 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 TMEM11P17152 192 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF658BQ4V348 819 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-216ENST00000639300 MSL2Q9HCI7 577 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 LPAR3Q9UBY5 353 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 TRDCB7Z8K6 153 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 YIF1AO95070 293 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF90Q03938 601 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF439Q8NDP4 499 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-216ENST00000639300 BOD1Q96IK1 185 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 ANGPTL4Q9BY76 406 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 TREM2Q9NZC2 230 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 V9GYS6 101 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 CACNA1BQ00975 2339 aa12.58□□□□□ -0.4
SCARB2-216ENST00000639300 IGKV1D-43A0A0B4J1Z2 117 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 M0R296 226 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 DNPH1O43598 174 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 RCC1P18754 421 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 THBS3P49746 956 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 CMTM2Q8TAZ6 248 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 FAM206AQ9NX38 181 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 LOC101059948A0A1B0GTJ6 334 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 ISG15P05161 165 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 MPGP29372 298 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 DYNLT3P51808 116 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 SUB1P53999 127 aaKnown RBP eCLIP12.57□□□□□ -0.43e-7■■■□□ 19
SCARB2-216ENST00000639300 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF660Q6AZW8 331 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 GFRALQ6UXV0 394 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 SLC25A22Q9H936 323 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 IGHV1-45A0A0A0MS14 117 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 A0A0U1RQV5 110 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 SNRPEP62304 92 aaKnown RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 ERHP84090 104 aaKnown RBP12.57□□□□□ -0.4
SCARB2-216ENST00000639300 TGIF1Q15583 401 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 MESP1Q9BRJ9 268 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 OR10J4P0C629 311 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 STARD6P59095 220 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF154Q13106 437 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 TIGITQ495A1 244 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 TEX30Q5JUR7 227 aa12.57□□□□□ -0.4
SCARB2-216ENST00000639300 MAP1LC3B2A6NCE7 125 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 SYNGR2O43760 224 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 FGF5P12034 268 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 RAB4AP20338 218 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 FOXC1Q12948 553 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms