RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NDUFB11Q9NX14 153 aa17.74■□□□□ 0.43
SCN1B-206ENST00000638536 AK6Q9Y3D8 172 aaKnown RBP17.74■□□□□ 0.43
SCN1B-206ENST00000638536 SHISA3A0PJX4 238 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 CALRP27797 417 aaKnown RBP17.73■□□□□ 0.43
SCN1B-206ENST00000638536 GDNFP39905 211 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 C1orf100Q5SVJ3 147 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 ZNF773Q6PK81 442 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 TRAPPC6BQ86SZ2 158 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 FAM216AQ8WUB2 273 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 FAM46BQ96A09 425 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 DPCDQ9BVM2 203 aaPredicted RBP17.73■□□□□ 0.43
SCN1B-206ENST00000638536 IFT22Q9H7X7 185 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 KIF25Q9UIL4 384 aa17.73■□□□□ 0.43
SCN1B-206ENST00000638536 MGMTP16455 207 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 PSMA1P25786 263 aaKnown RBP17.72■□□□□ 0.43
SCN1B-206ENST00000638536 PSMB9P28065 219 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 LDLRAD2Q5SZI1 272 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 UTF1Q5T230 341 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 RSBN1Q5VWQ0 802 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-206ENST00000638536 ZFAND2BQ8WV99 257 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 CORO2AQ92828 525 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 TRAV39A0A0B4J263 110 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 CRTAPO75718 401 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-206ENST00000638536 OMGP23515 440 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 GPR176Q14439 515 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 ATAD3CQ5T2N8 411 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 GLT8D1Q68CQ7 371 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 CD200R1LQ6Q8B3 271 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 OR13A1Q8NGR1 328 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 SLC25A28Q96A46 364 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 SELENOIQ9C0D9 397 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 HEXA-AS1Q9H8Q6 139 aa17.72■□□□□ 0.43
SCN1B-206ENST00000638536 UBE2J1Q9Y385 318 aaPredicted RBP17.72■□□□□ 0.43
SCN1B-206ENST00000638536 TRGV10A0A0A0MS01 117 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 hCG_1809904A0A1W2PP81 198 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 A0A1W2PPE2 198 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 A0A1W2PR64 198 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 A0A1W2PRV1 198 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 IGHV4-59P01825 116 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 VSIG8P0DPA2 414 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 C17orf58Q2M2W7 97 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 PRAMEF5Q5TYX0 476 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 SIGIRRQ6IA17 410 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 LHFPL4Q7Z7J7 247 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 FOXRED1Q96CU9 486 aaPredicted RBP17.71■□□□□ 0.43
SCN1B-206ENST00000638536 CHIAQ9BZP6 476 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 FAM96BQ9Y3D0 163 aa17.71■□□□□ 0.43
SCN1B-206ENST00000638536 CLDN34H7C241 214 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 CCRL2O00421 344 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 SLC22A1O15245 554 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 ARL6IP5O75915 188 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 RBP4P02753 201 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 RNASE1P07998 156 aaKnown RBP17.7■□□□□ 0.42
SCN1B-206ENST00000638536 CGB3P0DN86 165 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 CGB7P0DN87 165 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 HTR2CP28335 458 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 MPV17LQ2QL34 196 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 KCTD21Q4G0X4 260 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 Q96M66 194 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 PCDHB16Q9NRJ7 776 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 ZNRD1Q9P1U0 126 aa17.7■□□□□ 0.42
SCN1B-206ENST00000638536 MEIKINA0A087WXM9 373 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 FUOMA2VDF0 154 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 FAM172BPA6NC97 362 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 CLPXO76031 633 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 CDK2P24941 298 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 IER3P46695 156 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 UNC119Q13432 240 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 LINC00596Q86U02 117 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 LDLRAD3Q86YD5 345 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 DYNAPQ8N1N2 210 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 SPATA3Q8NHX4 192 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 MRPS24Q96EL2 167 aaKnown RBP17.69■□□□□ 0.42
SCN1B-206ENST00000638536 SLITRK2Q9H156 845 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 RCC2Q9P258 522 aaKnown RBP17.69■□□□□ 0.42
SCN1B-206ENST00000638536 TRDV1A0A1B0GX56 115 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 ODF3BA8MYP8 253 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 MPIG6BO95866 241 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 FBP1P09467 338 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 QRFPP83859 136 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 P2RY14Q15391 338 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 MIDNQ504T8 468 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 BARHL1Q9BZE3 327 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 TAS2R3Q9NYW6 316 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 SESN1Q9Y6P5 492 aa17.69■□□□□ 0.42
SCN1B-206ENST00000638536 ARG1P05089 322 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 GLP1RP43220 463 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 CLDN12P56749 244 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 OR10A3P58181 314 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 PAX5Q02548 391 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 NEDD8Q15843 81 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 C22orf42Q6IC83 251 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 C16orf87Q6PH81 154 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 RTN4RL2Q86UN3 420 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 OR11H6Q8NGC7 330 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 MRGPRDQ8TDS7 321 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 FCGR1BQ92637 280 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 TMEM133Q9H2Q1 129 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 GHRLQ9UBU3 117 aa17.68■□□□□ 0.42
SCN1B-206ENST00000638536 IGHV2-26A0A0B4J1V2 119 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms