RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 CSMD2Q7Z408 3487 aa3.14□□□□□ -1.91
CLN5-214ENST00000636705 PRRC2CQ9Y520 2896 aaKnown RBP3.14□□□□□ -1.91
CLN5-214ENST00000636705 ATRQ13535 2644 aa3.14□□□□□ -1.91
CLN5-214ENST00000636705 IGHV3-15A0A0B4J1V0 119 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 IGHV4-28A0A0C4DH34 117 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 PSMB11A5LHX3 300 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 NPIPB9F8W1W9 429 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 OR7A10O76100 309 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 CECR9P0C854 216 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SAA4P35542 130 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 FUT6P51993 359 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 CEBPGP53567 150 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 DGCR2P98153 550 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 C1DQ13901 141 aaKnown RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 LAGE3Q14657 143 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 CD226Q15762 336 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 TSPO2Q5TGU0 170 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 OR2G6Q5TZ20 316 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ARL9Q6T311 187 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 LRRN1Q6UXK5 716 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SLC35F6Q8N357 371 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 OR52E4Q8NGH9 312 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 UFD1Q92890 307 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 RAB8BQ92930 207 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SDF2Q99470 211 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 EBPLQ9BY08 206 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 DPY30Q9C005 99 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 USE1Q9NZ43 259 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 AP3M1Q9Y2T2 418 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 TMED7-TICAM2A0A0A6YYA0 188 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 IGHV2OR16-5A0A0B4J2B6 119 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 LOC102725191A0A1B0GVB3 256 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 C5orf63A6NC05 138 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 B4DXG7 233 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 H3BSA7 217 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 EI24O14681 340 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SURF4O15260 269 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 MPDU1O75352 247 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 IGHV3-9P01782 118 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 OR4E1P0C645 316 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZP3P21754 424 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SHC1P29353 583 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 DAP3P51398 398 aaKnown RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 DNAJB13P59910 316 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 MRPS25P82663 173 aaKnown RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZNF85Q03923 595 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 PLP2Q04941 152 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 C2orf54Q08AI8 447 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SKP2Q13309 424 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 GSG1Q2KHT4 349 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 Q6ZTK2 550 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ABHD12Q8N2K0 398 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZDHHC22Q8N966 263 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 SYT8Q8NBV8 401 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZNF738Q8NE65 137 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 RNF133Q8WVZ7 376 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 CDS1Q92903 461 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 URB1-AS1Q96HZ7 61 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZNF488Q96MN9 340 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 CENPHQ9H3R5 247 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 ZCCHC4Q9H5U6 513 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 NANOGQ9H9S0 305 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 VCX3AQ9NNX9 186 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 MEPEQ9NQ76 525 aaPredicted RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 CTPS2Q9NRF8 586 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 TREM2Q9NZC2 230 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 POLR3HQ9Y535 204 aaPredicted RBP3.13□□□□□ -1.91
CLN5-214ENST00000636705 ABCA1O95477 2261 aa3.13□□□□□ -1.91
CLN5-214ENST00000636705 IGHV1-69-2A0A0G2JMI3 117 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 A0A1W2PR80 420 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 GMNCA6NCL1 334 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 LY6HO94772 140 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 NDUFB8O95169 186 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 LYPD3O95274 346 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 CLIC3O95833 236 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 DBIP07108 87 aaKnown RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 TFPTP0C1Z6 253 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 ACSM4P0C7M7 580 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 FASP25445 335 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 SERPINB5P36952 375 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 LEPP41159 167 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 IDH2P48735 452 aaKnown RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 KLF3P57682 345 aaPredicted RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 SEC61A1P61619 476 aaKnown RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 LMO4P61968 165 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 LSM6P62312 80 aaKnown RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 PAFAH1B2P68402 229 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 CKAP4Q07065 602 aaKnown RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 RIPPLY1Q0D2K3 151 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 TAL2Q16559 108 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 CEP85LQ5SZL2 805 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 IDNKQ5T6J7 187 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 OLFML2AQ68BL7 652 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 PGAP1Q75T13 922 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 WDFY1Q8IWB7 410 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 ZSCAN4Q8NAM6 433 aaPredicted RBP3.12□□□□□ -1.91
CLN5-214ENST00000636705 MFSD8Q8NHS3 518 aa3.12□□□□□ -1.91
CLN5-214ENST00000636705 ZNF519Q8TB69 540 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms