RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 OR4D6Q8NGJ1 314 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 MUL1Q969V5 352 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 BLOC1S6Q9UL45 172 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 LSM2Q9Y333 95 aaKnown RBP12.76□□□□□ -0.37
LINC00339-207ENST00000634712 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
LINC00339-207ENST00000634712 ANK2Q01484 3957 aa12.76□□□□□ -0.37
LINC00339-207ENST00000634712 KIAA2026Q5HYC2 2103 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 MAGEA13PA6NCF6 341 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 NDUFA7O95182 113 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 CRHBPP24387 322 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 CDK2P24941 298 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 KCNJ3P48549 501 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 RBM11P57052 281 aaKnown RBP12.75□□□□□ -0.37
LINC00339-207ENST00000634712 IRF3Q14653 427 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
LINC00339-207ENST00000634712 ATAD3CQ5T2N8 411 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 AWAT2Q6E213 333 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 GLIPR1L1Q6UWM5 242 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 LHFPL4Q7Z7J7 247 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 LINC00596Q86U02 117 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 NKAIN3Q8N8D7 197 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 FOXRED1Q96CU9 486 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-207ENST00000634712 MALSU1Q96EH3 234 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 COQ2Q96H96 371 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 CLEC7AQ9BXN2 247 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 ABCB10Q9NRK6 738 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 TENM1Q9UKZ4 2725 aa12.75□□□□□ -0.37
LINC00339-207ENST00000634712 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 IGHV2-26A0A0B4J1V2 119 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
LINC00339-207ENST00000634712 PIN1P1O15428 100 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 LY6EQ16553 131 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 AANATQ16613 207 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 NHLRC3Q5JS37 347 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 LIPKQ5VXJ0 399 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 ZNF626Q68DY1 528 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 SHISA2Q6UWI4 295 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 UNQ9370/PRO34162Q6UXP9 181 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 HEPN1Q6WQI6 88 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 ABHD12Q8N2K0 398 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 NDNFQ8TB73 568 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 NEK7Q8TDX7 302 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 DPCDQ9BVM2 203 aaPredicted RBP12.74□□□□□ -0.37
LINC00339-207ENST00000634712 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 PPIL3Q9H2H8 161 aaKnown RBP12.74□□□□□ -0.37
LINC00339-207ENST00000634712 Q9H521 79 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 MMP24Q9Y5R2 645 aa12.74□□□□□ -0.37
LINC00339-207ENST00000634712 FAM90A8PA6NJQ4 464 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 ZNF729A6NN14 1252 aaPredicted RBP12.73□□□□□ -0.37
LINC00339-207ENST00000634712 ODF3BA8MYP8 253 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 PAX6P26367 422 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 GLP1RP43220 463 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 INSL4Q14641 139 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 FAM189A2Q15884 450 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 SSX2Q16385 188 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 TMEM203Q969S6 136 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 MRPS24Q96EL2 167 aaKnown RBP12.73□□□□□ -0.37
LINC00339-207ENST00000634712 AJUBAQ96IF1 538 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 NCOR1P1Q9H4R4 102 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 ISYNA1Q9NPH2 558 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
LINC00339-207ENST00000634712 A0A1W2PP11 408 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 CLPSL1A2RUU4 121 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 TOR1AO14656 332 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 MMP23AO75900 390 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 NFYBP25208 207 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 RELBQ01201 579 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 TRAM1Q15629 374 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 HSD17B12Q53GQ0 312 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 MINOS1Q5TGZ0 78 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 OLFML2AQ68BL7 652 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 ZNF596Q8TC21 504 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 SPACA1Q9HBV2 294 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 RAB18Q9NP72 206 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 HILPDAQ9Y5L2 63 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 MINOS1-NBL1R4GNA1 71 aa12.72□□□□□ -0.37
LINC00339-207ENST00000634712 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 H3BUI4 141 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 CRTAPO75718 401 aaPredicted RBP12.71□□□□□ -0.37
LINC00339-207ENST00000634712 SRMP19623 302 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 HTR1DP28221 377 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 MAP2K4P45985 399 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 PRRX1P54821 245 aa12.71□□□□□ -0.37
LINC00339-207ENST00000634712 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.37
LINC00339-207ENST00000634712 TPBGQ13641 420 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms