RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ST3GAL2Q16842 350 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 FAHD2BQ6P2I3 314 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 TEX261Q6UWH6 196 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 OR2C3Q8N628 320 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 FAHD2AQ96GK7 314 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 MS4A5Q9H3V2 200 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 SIRT5Q9NXA8 310 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 CLN8Q9UBY8 286 aa10.36□□□□□ -0.75
SHPRH-211ENST00000629427 TMEFF2Q9UIK5 374 aaPredicted RBP10.36□□□□□ -0.75
SHPRH-211ENST00000629427 IL13RA2Q14627 380 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 KCNMB1Q16558 191 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 RNFT1Q5M7Z0 435 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 OR10A7Q8NGE5 316 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 SIPA1L3O60292 1781 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 ASPDHA6ND91 283 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 CRYBB2P43320 205 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF764Q96H86 408 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 ZMAT5Q9UDW3 170 aaKnown RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 STARD10Q9Y365 291 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 CCKARP32238 428 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 TSPO2Q5TGU0 170 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 MUC20Q8N307 709 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 HARBI1Q96MB7 349 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 CA10Q9NS85 328 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 MTFP1Q9UDX5 166 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 WSB1Q9Y6I7 421 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 PRSS44E7EML9 344 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 ATP6V1FQ16864 119 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 SLC26A10Q8NG04 563 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 QSER1Q2KHR3 1735 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 RHBDL1O75783 438 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 SRD5A3Q9H8P0 318 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 MBD1Q9UIS9 605 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 CSN3P07498 182 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 CST2P09228 141 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 PMS2P11Q13670 270 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 IQCJQ1A5X6 159 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-211ENST00000629427 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
SHPRH-211ENST00000629427 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 DUSP15Q9H1R2 295 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 MAP6Q96JE9 813 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 LIPT2A6NK58 231 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 CDC20Q12834 499 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 GGTLC2Q14390 218 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 PSG5Q15238 335 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 SLC25A10Q9UBX3 287 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF207O43670 478 aaKnown RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF770Q6IQ21 691 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 ALG14Q96F25 216 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 UCN2Q96RP3 112 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 NRTNQ99748 197 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 PIPOXQ9P0Z9 390 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 ERVS71-1P61550 626 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 LSM6P62312 80 aaKnown RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 AESQ08117 197 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 COL19A1Q14993 1142 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 UQCC3Q6UW78 93 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF426Q9BUY5 554 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 SF3B5Q9BWJ5 86 aaKnown RBP10.34□□□□□ -0.75
SHPRH-211ENST00000629427 IGHV3-21A0A0B4J1V1 117 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 PMELP40967 661 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 SMRP1Q8NCR6 262 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 OR4P4Q8NGL7 312 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 C12orf57Q99622 126 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 SLC35B3Q9H1N7 401 aa10.34□□□□□ -0.75
SHPRH-211ENST00000629427 VN1R4Q7Z5H5 301 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 SSMEM1Q8WWF3 244 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 PERPQ96FX8 193 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 COL18A1P39060 1754 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 HRKO00198 91 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 CIDEAO60543 219 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 SLC6A1P30531 599 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 REG1BP48304 166 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 RNF212Q495C1 297 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 D2HGDHQ8N465 521 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 TOLLIPQ9H0E2 274 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 SLC2A9Q9NRM0 540 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
SHPRH-211ENST00000629427 M0R2Z0 102 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 HAX1O00165 279 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 FXYD1O00168 92 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 PRR35P0CG20 571 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 HIST1H1EP10412 219 aaKnown RBP10.33□□□□□ -0.76
SHPRH-211ENST00000629427 ID1P41134 155 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
SHPRH-211ENST00000629427 MANBALQ9NQG1 85 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 ADRA2AP08913 450 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 CD226Q15762 336 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 FAM78BQ5VT40 261 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 SLC23A3Q6PIS1 610 aa10.33□□□□□ -0.76
SHPRH-211ENST00000629427 SH2D5Q6ZV89 423 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms