RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ATAD3CQ5T2N8 411 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 OR10K2Q6IF99 312 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 GDPGP1Q6ZNW5 385 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 OR2W3Q7Z3T1 314 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 TPRA1Q86W33 373 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 PRIMA1Q86XR5 153 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 BPIFB2Q8N4F0 458 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 C11orf42Q8N5U0 333 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 TNFRSF14Q92956 283 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 LHX4Q969G2 390 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 ZNF714Q96N38 554 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 MRPS26Q9BYN8 205 aaKnown RBP16.65■□□□□ 0.26
PTCD3-220ENST00000627371 ZNF69Q9UC07 566 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 STEAP1Q9UHE8 339 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 hCG_1809904A0A1W2PP81 198 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 A0A1W2PPE2 198 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 A0A1W2PR64 198 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 A0A1W2PRV1 198 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 ODAMA1E959 279 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 MEX3AA1L020 520 aaKnown RBP16.64■□□□□ 0.25
PTCD3-220ENST00000627371 IFITM5A6NNB3 132 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 C17orf98A8MV24 154 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 ZNF728P0DKX0 622 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 GLIPR1P48060 266 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 CLDN12P56749 244 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 BPIFB3P59826 476 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 RPS27AP62979 156 aaKnown RBP16.64■□□□□ 0.25
PTCD3-220ENST00000627371 HES5Q5TA89 166 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 NCR3LG1Q68D85 454 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 C9orf139Q6ZV77 190 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 NR2C2APQ86WQ0 139 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 OR51D1Q8NGF3 324 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 FAM3DQ96BQ1 224 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 CENPOQ9BU64 300 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 TM2D1Q9BX74 207 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 BARHL1Q9BZE3 327 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 RNF167Q9H6Y7 350 aa16.64■□□□□ 0.25
PTCD3-220ENST00000627371 UBE2J1Q9Y385 318 aaPredicted RBP16.64■□□□□ 0.25
PTCD3-220ENST00000627371 H3BUI4 141 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 AIPO00170 330 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 RBP4P02753 201 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 FPR2P25090 351 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 DLX1P56177 255 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 RSBN1Q5VWQ0 802 aaPredicted RBP16.63■□□□□ 0.25
PTCD3-220ENST00000627371 TRAPPC6BQ86SZ2 158 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 OR13F1Q8NGS4 319 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 PLPPR1Q8TBJ4 325 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 C22orf15Q8WYQ4 148 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 CORO2AQ92828 525 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 MS4A7Q9GZW8 240 aaPredicted RBP16.63■□□□□ 0.25
PTCD3-220ENST00000627371 NCOR1P1Q9H4R4 102 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 ING3Q9NXR8 418 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 FBLN5Q9UBX5 448 aa16.63■□□□□ 0.25
PTCD3-220ENST00000627371 TRGV10A0A0A0MS01 117 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 IGHV1-69DA0A0B4J2H0 117 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 NOTOA8MTQ0 251 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 RNASEK-C17orf49H0YIS7 233 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 AIREO43918 545 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 IGHV1-69P01742 117 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 SDC2P34741 201 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 ERVFRD-1P60508 538 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 GUCA2AQ02747 115 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 TUSC1Q2TAM9 212 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 RUSC1-AS1Q66K80 236 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 SIGIRRQ6IA17 410 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 RAB12Q6IQ22 244 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 BRD3OSQ6XYD6 125 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 SLC6A7Q99884 636 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 OR6C3Q9NZP0 311 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 KIF25Q9UIL4 384 aa16.62■□□□□ 0.25
PTCD3-220ENST00000627371 SMIM30A4D0T7 59 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 MCRIP1C9JLW8 97 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 LDLRAD4O15165 306 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 PDCD6O75340 191 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 GLAP06280 429 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 FUT3P21217 361 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 PRB3Q04118 309 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-220ENST00000627371 KLRD1Q13241 179 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 RBM39Q14498 530 aaKnown RBP16.61■□□□□ 0.25
PTCD3-220ENST00000627371 C2orf76Q3KRA6 126 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 SLC35E4Q6ICL7 350 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 BRICD5Q6PL45 260 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 PDZD9Q8IXQ8 264 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 BCL6BQ8N143 479 aaPredicted RBP16.61■□□□□ 0.25
PTCD3-220ENST00000627371 NEK7Q8TDX7 302 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 URM1Q9BTM9 101 aaKnown RBP16.61■□□□□ 0.25
PTCD3-220ENST00000627371 LPAR5Q9H1C0 372 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 GAL3ST2Q9H3Q3 398 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 OCEL1Q9H607 264 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 TAS2R3Q9NYW6 316 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 PEX16Q9Y5Y5 336 aa16.61■□□□□ 0.25
PTCD3-220ENST00000627371 MEIKINA0A087WXM9 373 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 CLPXO76031 633 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 NICN1Q9BSH3 213 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 FUNDC2Q9BWH2 189 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 SUCNR1Q9BXA5 334 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 LIN7BQ9HAP6 207 aa16.6■□□□□ 0.25
PTCD3-220ENST00000627371 A0A0A6YYD4 124 aa16.59■□□□□ 0.25
PTCD3-220ENST00000627371 TMEM272A0A1B0GTI8 110 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms